RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SERPINB4P48594 390 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 FSTL1Q12841 308 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 VARS2Q5ST30 1063 aaKnown RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 LNX1Q8TBB1 728 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 COL26A1Q96A83 441 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 CATSPER2Q96P56 530 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 TNKS2Q9H2K2 1166 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 PARVBQ9HBI1 364 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 RAD54BQ9Y620 910 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 SLIT2O94813 1529 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 TRBV23OR9-2A0A075B6M9 112 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 APOC4-APOC2K7ER74 178 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 KLRC4O43908 158 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 KRT6AP02538 564 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 APOC2P02655 101 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 KRT6BP04259 564 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 C8AP07357 584 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 GSTM1P09488 218 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 RPL21P46778 160 aaKnown RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 KRT6CP48668 564 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 CNGA3Q16281 694 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 EML3Q32P44 896 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 CNSTQ6PJW8 725 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 CIR1Q86X95 450 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 SUGP1Q8IWZ8 645 aaKnown RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 FBXO25Q8TCJ0 367 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 PHF21AQ96BD5 680 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 SEC16BQ96JE7 1060 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 KCNK16Q96T55 309 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 VAT1Q99536 393 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 FAM126AQ9BYI3 521 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 CHST7Q9NS84 486 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 STOML1Q9UBI4 398 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 ZFP37Q9Y6Q3 630 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 ISM1B1AKI9 464 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 STBD1O95210 358 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 ZNF135P52742 658 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 SMARCB1Q12824 385 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 OLFML2BQ68BL8 750 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 LINGO4Q6UY18 593 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 KATNAL2Q8IYT4 538 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 KREMEN2Q8NCW0 462 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 CNDP1Q96KN2 507 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 SNX27Q96L92 541 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 NDNQ99608 321 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 HGH1Q9BTY7 390 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 TBC1D14Q9P2M4 693 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 KLHL3Q9UH77 587 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 GTF2IRD1Q9UHL9 959 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 KCPQ6ZWJ8 1503 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 FAM208AQ9UK61 1670 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 A0A1W2PQ45 241 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 A0A1W2PQY0 241 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CES2O00748 559 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 RASGRP1O95267 797 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 MATKP42679 507 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 RRP1BQ14684 758 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 CNKSR3Q6P9H4 555 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PRR23BQ6ZRT6 265 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 STK40Q8N2I9 435 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 FNDC5Q8NAU1 212 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 RERGQ96A58 199 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 EME1Q96AY2 570 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 DPY30Q9C005 99 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 GANQ9H2C0 597 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CNGB3Q9NQW8 809 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 OPTCQ9UBM4 332 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CACNG4Q9UBN1 327 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 SLC38A8A6NNN8 435 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 TPST1O60507 370 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 SLC25A14O95258 325 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 BMP10O95393 424 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 EOMESO95936 686 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CYP1A2P05177 515 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PECAM1P16284 738 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 GP5P40197 560 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 HNF4AP41235 474 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CCR4P51679 360 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 FMO1Q01740 532 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 MAP3K10Q02779 954 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 SULT2A1Q06520 285 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 ACTN3Q08043 901 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 KCNMA1Q12791 1236 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 AFTPHQ6ULP2 937 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 BBS7Q8IWZ6 715 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 FAM71AQ8IYT1 594 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 KIF2BQ8N4N8 673 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 MYCBPAPQ8TBZ2 947 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 MYO19Q96H55 970 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CCT8L2Q96SF2 557 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 FGFBP2Q9BYJ0 223 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 RSPH9Q9H1X1 276 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 TMEM51Q9NW97 253 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 NCKIPSDQ9NZQ3 722 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 STK39Q9UEW8 545 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CD84Q9UIB8 345 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PPIEQ9UNP9 301 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 A0A087X1B8 175 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PHGDHO43175 533 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 C1RP00736 705 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms