RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 C10orf107Q8IVU9 208 aa11.62□□□□□ -0.55
SLC28A1-204ENST00000538177 CADM1Q9BY67 442 aaKnown RBP11.62□□□□□ -0.55
SLC28A1-204ENST00000538177 IARS2Q9NSE4 1012 aaKnown RBP11.62□□□□□ -0.55
SLC28A1-204ENST00000538177 DNAJB4Q9UDY4 337 aa11.62□□□□□ -0.55
SLC28A1-204ENST00000538177 PRG3Q9Y2Y8 225 aaPredicted RBP11.62□□□□□ -0.55
SLC28A1-204ENST00000538177 L3MBTL1Q9Y468 752 aa11.62□□□□□ -0.55
SLC28A1-204ENST00000538177 PCDHB5Q9Y5E4 795 aa11.62□□□□□ -0.55
SLC28A1-204ENST00000538177 CENPFP49454 3210 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 A0A096LPK6 155 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 FAM92AA1XBS5 289 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 TADA2AO75478 443 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 MOCS2O96007 188 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 MT-CYBP00156 380 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 KITP10721 976 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 ESRRAP11474 423 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 CPA3P15088 417 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 GPR15P49685 360 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 PAPOLAP51003 745 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 GTF2A1P52655 376 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 MRPL58Q14197 206 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 E2F5Q15329 346 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 PIK3R6Q5UE93 754 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 SDHAF4Q5VUM1 108 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 POTEHQ6S545 545 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 WDR75Q8IWA0 830 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 ZNF683Q8IZ20 524 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 PLD6Q8N2A8 252 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 PIWIL2Q8TC59 973 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 VPS39Q96JC1 886 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 ZNF778Q96MU6 729 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 FAM193BQ96PV7 902 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 FTHL17Q9BXU8 183 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 STN1Q9H668 368 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 EBF2Q9HAK2 575 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 ENTPD7Q9NQZ7 604 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 ZNF358Q9NW07 568 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 RBM22Q9NW64 420 aaKnown RBP eCLIP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 MPP6Q9NZW5 540 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 MARCOQ9UEW3 520 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 MAGED2Q9UNF1 606 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 DNAJC16Q9Y2G8 782 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 GSC2O15499 205 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 LYPLA1O75608 230 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 C2P06681 752 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 RALBP11234 206 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 HOXD10P28358 340 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 GMPRP36959 345 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 HARS2P49590 506 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 USP46P62068 366 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 NOGQ13253 232 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 CNTN4Q8IWV2 1026 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 UMODL1-AS1Q8N2C9 162 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 SH3TC2Q8TF17 1288 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 FATE1Q969F0 183 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 SORT1Q99523 831 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 GPR22Q99680 433 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 RHOJQ9H4E5 214 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 NOL6Q9H6R4 1146 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 MRM3Q9HC36 420 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 TAS2R1Q9NYW7 299 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 ARMCX1Q9P291 453 aa11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 PPARGC1AQ9UBK2 798 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 IPO11Q9UI26 975 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-204ENST00000538177 OR6C75A6NL08 312 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 HLA-DQB2P05538 268 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 SERPINA6P08185 405 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 GRK4P32298 578 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 NDST2P52849 883 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 TBX4P57082 545 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ABCE1P61221 599 aaKnown RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 DLG2Q15700 870 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 TBCCQ15814 346 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ANO4Q32M45 955 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 RANBP10Q6VN20 620 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ATG14Q6ZNE5 492 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ZC3HC1Q86WB0 502 aaKnown RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 TREML1Q86YW5 311 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 IPMKQ8NFU5 416 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ATXN7L3BQ96GX2 97 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 FICDQ9BVA6 458 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ELAC1Q9H777 363 aaKnown RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 PRDM5Q9NQX1 630 aaPredicted RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 CLIC5Q9NZA1 410 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 GMIPQ9P107 970 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 SORCS3Q9UPU3 1222 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 FNDC1Q4ZHG4 1894 aaPredicted RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 A0A1W2PQ45 241 aaPredicted RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 A0A1W2PQY0 241 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 G3V2L1 256 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 GYG2O15488 501 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 PEX11AO75192 247 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 PEX11BO96011 259 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 F7P08709 466 aaPredicted RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 RHOQP17081 205 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 GM2AP17900 193 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ABCG1P45844 678 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms