RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 GOLGA8RI6L899 631 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 NDC80O14777 642 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 POLR3GO15318 223 aaPredicted RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 KRT14P02533 472 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 GNA12Q03113 381 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 SMARCB1Q12824 385 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 BYSLQ13895 437 aaKnown RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 AMZ1Q400G9 498 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 HID1Q8IV36 788 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 ELOA2Q8IYF1 753 aaPredicted RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 SGF29Q96ES7 293 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 KLF6Q99612 283 aaPredicted RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 SLC7A5P2Q9GIP4 190 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 RC3H2Q9HBD1 1191 aaKnown RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 SAYSD1Q9NPB0 183 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 CRLS1Q9UJA2 301 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 DNPEPQ9ULA0 475 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 CHMP2BQ9UQN3 213 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 JRKLQ9Y4A0 524 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 GPSM3Q9Y4H4 160 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 PLXNB2O15031 1838 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 SCN5AQ14524 2016 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 SPTBP11277 2137 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 UQCRHLA0A096LP55 91 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 MFSD11O43934 449 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 PCCBP05166 539 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 SERPINF2P08697 491 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 HNRNPA1P09651 372 aaKnown RBP eCLIP7.38□□□□□ -1.23
MSH6-209ENST00000538136 MMP13P45452 471 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 SLC10A7Q0GE19 358 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 ADAM15Q13444 863 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 BOP1Q14137 746 aaKnown RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 PTPRCAPQ14761 206 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 P3H1Q32P28 736 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 EGFLAMQ63HQ2 1017 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 SLC26A9Q7LBE3 791 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 PHACTR4Q8IZ21 702 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 PPM1NQ8N819 430 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 ALG3Q92685 438 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 C8orf48Q96LL4 319 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 TSNARE1Q96NA8 513 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 MLXIPLQ9NP71 852 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 HAUS2Q9NVX0 235 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 DONSONQ9NYP3 566 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 KIAA1522Q9P206 1035 aaPredicted RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 MYOFQ9NZM1 2061 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 CCDC66A2RUB6 948 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 WDR91A4D1P6 747 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 RNF103O00237 685 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 GABRDO14764 452 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 BANF1O75531 89 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 HOXC8P31273 242 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 SGSHP51688 502 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 DR1Q01658 176 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 CKAP4Q07065 602 aaKnown RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 LMAN2Q12907 356 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 PDK1Q15118 436 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 ELF2Q15723 593 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 HGSNATQ68CP4 663 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 AGR3Q8TD06 166 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 SHDQ96IW2 340 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 KCTD15Q96SI1 283 aaPredicted RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 DNAJC7Q99615 494 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 SPATA16Q9BXB7 569 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 EDEM3Q9BZQ6 932 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 FSCN3Q9NQT6 498 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 ZDHHC7Q9NXF8 308 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 MTRF1LQ9UGC7 380 aaKnown RBP7.38□□□□□ -1.23
MSH6-209ENST00000538136 PSMD13Q9UNM6 376 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 NUP205Q92621 2012 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 E5RI56 91 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 SPECC1L-ADORA2AF8WAN1 911 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 SMAD6O43541 496 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 GJB3O75712 270 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CHRM3P20309 590 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CTNNA1P35221 906 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 DAB2P98082 770 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 ECT2LQ008S8 904 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 PLCL1Q15111 1095 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 TRIP4Q15650 581 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 MS4A13Q5J8X5 152 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 RHBDF2Q6PJF5 856 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 ZBED8Q8IZ13 594 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CD101Q93033 1021 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 DCUN1D1Q96GG9 259 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 SELENOSQ9BQE4 189 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 SLC39A8Q9C0K1 460 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 EIF2B4Q9UI10 523 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 GGA2Q9UJY4 613 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CFAP20Q9Y6A4 193 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 A0A1B0GVM2 712 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 TCAF2A6NFQ2 919 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 TMEM191CA6NGB0 347 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 C2CD4BA6NLJ0 364 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 MMP20O60882 483 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 PECAM1P16284 738 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 HMGA1P17096 107 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 TCP1P17987 556 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 NFKB1P19838 968 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 PSMB4P28070 264 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms