RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 A0A1W2PP55 124 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 DCDC2BA2VCK2 349 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 WASH4PA8MWX3 477 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 SLC30A4O14863 429 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 MCF2LO15068 1137 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 MFAP3LO75121 409 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 IL4RP24394 825 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 GKP32189 559 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ID4P47928 161 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 PSMD8P48556 350 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ARSEP51690 589 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 OXCT1P55809 520 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ST8SIA6P61647 398 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 SLC25A11Q02978 314 aaKnown RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 LMNB2Q03252 620 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ZBTB16Q05516 673 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 MAPK8IP2Q13387 824 aaPredicted RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 ARL13BQ3SXY8 428 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 POM121L1PQ3SYA9 428 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 TDRD12Q587J7 1177 aaKnown RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 KCNT1Q5JUK3 1230 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 CCDC122Q5T0U0 273 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 C6orf118Q5T5N4 469 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ACBD5Q5T8D3 534 aaPredicted RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 STPG1Q5TH74 334 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 DCAF12L1Q5VU92 463 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 AFMIDQ63HM1 303 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ZNF776Q68DI1 518 aaPredicted RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 RWDD4Q6NW29 188 aaKnown RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 SLC23A3Q6PIS1 610 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ZNF783Q6ZMS7 281 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 DPY19L3Q6ZPD9 716 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 CCDC117Q8IWD4 279 aaPredicted RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 ARHGAP12Q8IWW6 846 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 RTL3Q8N8U3 475 aaKnown RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 TC2NQ8N9U0 490 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 CADM4Q8NFZ8 388 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ARRDC3Q96B67 414 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 BIRC7Q96CA5 298 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 TBC1D31Q96DN5 1066 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 HMCESQ96FZ2 354 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 NSMCE3Q96MG7 304 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 TNKS2Q9H2K2 1166 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 LRRC19Q9H756 370 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 FBRSQ9HAH7 460 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ABHD10Q9NUJ1 306 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 ETNK2Q9NVF9 386 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 FBXL12Q9NXK8 326 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 EVLQ9UI08 416 aaPredicted RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.59□□□□□ -1.03
SPARC-208ENST00000538026 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.59□□□□□ -1.03
SPARC-208ENST00000538026 MAP1BP46821 2468 aaKnown RBP8.58□□□□□ -1.04
SPARC-208ENST00000538026 C4orf47A7E2U8 309 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 PRR5-ARHGAP8B1AHC4 643 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 CBX4O00257 560 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 KDELR3O43731 214 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 CREB3O43889 395 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 GJB3O75712 270 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 SEMA4FO95754 770 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 IL1BP01584 269 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 CD48P09326 243 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 MYBL1P10243 752 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 GOT1P17174 413 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 EPHB2P29323 1055 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 OXTRP30559 389 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 MAPKAPK2P49137 400 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 SERPINH1P50454 418 aaKnown RBP8.58□□□□□ -1.04
SPARC-208ENST00000538026 LIMK1P53667 647 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 ADPRHP54922 357 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 ARHGAP8P85298 464 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 CNTN1Q12860 1018 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 DPYSQ14117 519 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 ELAVL3Q14576 367 aaKnown RBP8.58□□□□□ -1.04
SPARC-208ENST00000538026 E2F5Q15329 346 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 CYTH1Q15438 398 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 SLC18A3Q16572 532 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 ACCSLQ4AC99 568 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 ATP13A4Q4VNC1 1196 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 TRIM61Q5EBN2 209 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 EFHC2Q5JST6 749 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 ERMARDQ5T6L9 678 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 PIP5KL1Q5T9C9 394 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 AGBL4Q5VU57 503 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 PPP1R2P3Q6NXS1 205 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 NCEH1Q6PIU2 408 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 ARHGAP36Q6ZRI8 547 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 USP30Q70CQ3 517 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 UMODL1-AS1Q8N2C9 162 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 HDDC3Q8N4P3 179 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 NPWQ8N729 165 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 NIPA2Q8N8Q9 360 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 ATP11CQ8NB49 1132 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 TSC1Q92574 1164 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 IQCDQ96DY2 449 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 C2orf49Q9BVC5 232 aaPredicted RBP8.58□□□□□ -1.04
SPARC-208ENST00000538026 NUP85Q9BW27 656 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 SLC39A8Q9C0K1 460 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 DHX35Q9H5Z1 703 aaKnown RBP8.58□□□□□ -1.04
SPARC-208ENST00000538026 CAAP1Q9H8G2 361 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 PDFQ9HBH1 243 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms