RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 EBF2Q9HAK2 575 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 ATP13A1Q9HD20 1204 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 TMEM216Q9P0N5 145 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 TXNDC16Q9P2K2 825 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 TTC3P53804 2025 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 C2orf71A6NGG8 1288 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 HLA-DQB2P05538 268 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 SLC2A3P11169 496 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 FGFR3P22607 806 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 GEMP55040 296 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 PDE1BQ01064 536 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 TBCCQ15814 346 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 PPM1JQ5JR12 505 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 PCID2Q5JVF3 399 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 CCDC91Q7Z6B0 441 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 LCA5Q86VQ0 697 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 ARID3BQ8IVW6 561 aaPredicted RBP9.47□□□□□ -0.89
UBE3B-207ENST00000537063 CRIPAKQ8N1N5 446 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 FAM13CQ8NE31 585 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 NMUR2Q9GZQ4 415 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 SIK2Q9H0K1 926 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 COMMD8Q9NX08 183 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
UBE3B-207ENST00000537063 ZNF212Q9UDV6 495 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 PCDHB5Q9Y5E4 795 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 OR6C75A6NL08 312 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 ITM2AO43736 263 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 TBC1D4O60343 1298 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 CCDC22O60826 627 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 TYK2P29597 1187 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 ARRB2P32121 409 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 ARCN1P48444 511 aaKnown RBP9.47□□□□□ -0.89
UBE3B-207ENST00000537063 POLD2P49005 469 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 GPR15P49685 360 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 TUBP50607 506 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 NDST2P52849 883 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 USP46P62068 366 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 RPL10AP62906 217 aaKnown RBP9.47□□□□□ -0.89
UBE3B-207ENST00000537063 MPP3Q13368 585 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 GPNMBQ14956 572 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 WASHC2DQ5SRD0 308 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 PKN3Q6P5Z2 889 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 ATG14Q6ZNE5 492 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 TTC7BQ86TV6 843 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 ALYREFQ86V81 257 aaKnown RBP9.47□□□□□ -0.89
UBE3B-207ENST00000537063 SPATA22Q8NHS9 363 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 TADA1Q96BN2 335 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 BTBD10Q9BSF8 475 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 C1QTNF1Q9BXJ1 281 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 TREX1Q9NSU2 369 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 TMEM248Q9NWD8 314 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 CLIC5Q9NZA1 410 aa9.47□□□□□ -0.89
UBE3B-207ENST00000537063 G3V2L1 256 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 VNN2O95498 520 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.89
UBE3B-207ENST00000537063 ARNTP27540 789 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 HSP90AA5PQ58FG0 334 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 POTEHQ6S545 545 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 KDELC1Q6UW63 502 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 RANBP10Q6VN20 620 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 ZCCHC23Q6ZST2 131 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 CMC1Q7Z7K0 106 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 LONP2Q86WA8 852 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 ZC3HC1Q86WB0 502 aaKnown RBP9.46□□□□□ -0.89
UBE3B-207ENST00000537063 C10orf107Q8IVU9 208 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 CFAP61Q8NHU2 1237 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 VPS39Q96JC1 886 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 SPATA17Q96L03 361 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 CASD1Q96PB1 797 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 APOL2Q9BQE5 337 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 CCDC106Q9BWC9 280 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 CADM1Q9BY67 442 aaKnown RBP9.46□□□□□ -0.89
UBE3B-207ENST00000537063 MMADHCQ9H3L0 296 aaPredicted RBP9.46□□□□□ -0.89
UBE3B-207ENST00000537063 ARNT2Q9HBZ2 717 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 ENTPD7Q9NQZ7 604 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 C20orf96Q9NUD7 363 aaPredicted RBP9.46□□□□□ -0.89
UBE3B-207ENST00000537063 MARCH5Q9NX47 278 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 PHF24Q9UPV7 400 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 ANKRD6Q9Y2G4 727 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 STK38LQ9Y2H1 464 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 ZNF195O14628 629 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 ATP9BO43861 1147 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 RHOQP17081 205 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 OR1G1P47890 313 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 SLC1A6P48664 564 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 PAPOLAP51003 745 aaKnown RBP9.46□□□□□ -0.89
UBE3B-207ENST00000537063 RABGAP1LQ5R372 815 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 PLD6Q8N2A8 252 aaKnown RBP9.46□□□□□ -0.89
UBE3B-207ENST00000537063 PIWIL2Q8TC59 973 aaKnown RBP9.46□□□□□ -0.89
UBE3B-207ENST00000537063 AZIN2Q96A70 460 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 MRGPRX2Q96LB1 330 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 RHOJQ9H4E5 214 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 GMIPQ9P107 970 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.46□□□□□ -0.89
UBE3B-207ENST00000537063 SORCS3Q9UPU3 1222 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 TCAF1Q9Y4C2 921 aa9.46□□□□□ -0.89
UBE3B-207ENST00000537063 SERPINA6P08185 405 aa9.46□□□□□ -0.9
UBE3B-207ENST00000537063 TPH1P17752 444 aa9.46□□□□□ -0.9
UBE3B-207ENST00000537063 HOXD10P28358 340 aa9.46□□□□□ -0.9
UBE3B-207ENST00000537063 CCNG1P51959 295 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms