RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ADAMTS10Q9H324 1103 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 HPS4Q9NQG7 708 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 XPNPEP3Q9NQH7 507 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SAE1Q9UBE0 346 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 NOTOA8MTQ0 251 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 F5H6K3 240 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 MSH4O15457 936 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 LDLRP01130 860 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 KLRC2P26717 231 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PSME3P61289 254 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 MPP1Q00013 466 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF543Q08ER8 600 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 OXA1LQ15070 435 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TLR1Q15399 786 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ANKDD1AQ495B1 522 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 STK32CQ86UX6 486 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 MCPH1Q8NEM0 835 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SHC3Q92529 594 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 FBXO28Q9NVF7 368 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CNTN3Q9P232 1028 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SNCAIPQ9Y6H5 919 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PSMD12O00232 456 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TRIM38O00635 465 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 BCAS2O75934 225 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 GH2P01242 217 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 GLRA2P23416 452 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CRHR1P34998 444 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 GRIA3P42263 894 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 GABRB2P47870 512 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CCT3P49368 545 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PFKPQ01813 784 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CUL2Q13617 745 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 Q3C1V9 767 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 DENND1BQ6P3S1 775 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 EMC1Q8N766 993 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TP53INP1Q96A56 240 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SMAD5Q99717 465 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 THUMPD3Q9BV44 507 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PI4KBQ9UBF8 816 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF221Q9UK13 617 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CYP3A7-CYP3A51PA0A087WV96 503 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CCNKO75909 580 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 OR6B1O95007 311 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 NADKO95544 446 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 NR4A1P22736 598 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CYP3A7P24462 503 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 ABCG1P45844 678 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 ENTPD1P49961 510 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SAMD4BQ5PRF9 694 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 EEPD1Q7L9B9 569 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 C8orf59Q8N0T1 100 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 DUS3LQ96G46 650 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SMARCAD1Q9H4L7 1026 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 GPN2Q9H9Y4 310 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 MRM3Q9HC36 420 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SRP68Q9UHB9 627 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 STOML2Q9UJZ1 356 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PNMA8BQ9ULN7 279 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 COG5Q9UP83 839 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 LRP5O75197 1615 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PNMA8CA0A1B0GUJ8 204 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SDR42E2A6NKP2 422 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 LIASO43766 372 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 GCATO75600 419 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 OXSR1O95747 527 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 LSM8O95777 96 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 TGM2P21980 687 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 MAPRE1Q15691 268 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PHKG1Q16816 387 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 UGP2Q16851 508 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 TJAP1Q5JTD0 557 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 UNC5BQ8IZJ1 945 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SPERTQ8NA61 448 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PIK3C3Q8NEB9 887 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 BPIFB6Q8NFQ5 453 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 KAT5Q92993 513 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 RIOX1Q9H6W3 641 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 TBC1D22BQ9NU19 505 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CSADQ9Y600 493 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 MN1Q10571 1320 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 BAZ2BQ9UIF8 2168 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 EEF2KO00418 725 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SPTLC1O15269 473 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PTGER2P43116 358 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 RPL14P50914 215 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 ECT2LQ008S8 904 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 KLF1Q13351 362 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SLC10A5Q5PT55 438 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 STYK1Q6J9G0 422 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SLC2A7Q6PXP3 512 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 KLHL17Q6TDP4 642 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CES3Q6UWW8 571 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 TIFABQ6ZNK6 161 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 C3orf67Q6ZVT6 689 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 MFSD2AQ8NA29 543 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 OR7G1Q8NGA0 311 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 LILRB4Q8NHJ6 448 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 RDH11Q8TC12 318 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 ENKURQ8TC29 256 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 EPS8L1Q8TE68 723 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms