RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 LRRC43Q8N309 656 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 PDZD8Q8NEN9 1154 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 PTPRN2Q92932 1015 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 TSNARE1Q96NA8 513 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 SLC25A51Q9H1U9 297 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 PRDM5Q9NQX1 630 aaPredicted RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 RBM22Q9NW64 420 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMG6-203ENST00000536871 GMIPQ9P107 970 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 HSFX1Q9UBD0 423 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 IPO11Q9UI26 975 aaKnown RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 LNPEPQ9UIQ6 1025 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 SORCS3Q9UPU3 1222 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 HBS1LQ9Y450 684 aaKnown RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 MSI1O43347 362 aaKnown RBP13.81□□□□□ -0.2
SMG6-203ENST00000536871 ATP9BO43861 1147 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 TBC1D4O60343 1298 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 PLIN3O60664 434 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 CCDC22O60826 627 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 NBNO60934 754 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 ERVK-10P10266 1014 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 HAPLN1P10915 354 aaPredicted RBP13.81□□□□□ -0.2
SMG6-203ENST00000536871 MAPKAPK2P49137 400 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 OCRLQ01968 901 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 ZBTB16Q05516 673 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 BST1Q10588 318 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 PDE1CQ14123 709 aaPredicted RBP13.81□□□□□ -0.2
SMG6-203ENST00000536871 KRT72Q14CN4 511 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 DDR2Q16832 855 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 PARP15Q460N3 678 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 STRA8Q7Z7C7 330 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 CEP57Q86XR8 500 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 EGFL6Q8IUX8 553 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 WDR75Q8IWA0 830 aaKnown RBP13.81□□□□□ -0.2
SMG6-203ENST00000536871 CNTN4Q8IWV2 1026 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 FCRL3Q96P31 734 aaPredicted RBP13.81□□□□□ -0.2
SMG6-203ENST00000536871 FSD1LQ9BXM9 530 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 UBE2OQ9C0C9 1292 aaKnown RBP13.81□□□□□ -0.2
SMG6-203ENST00000536871 ARNT2Q9HBZ2 717 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 C20orf96Q9NUD7 363 aaPredicted RBP13.81□□□□□ -0.2
SMG6-203ENST00000536871 SAGE1Q9NXZ1 904 aa13.81□□□□□ -0.2
SMG6-203ENST00000536871 A0A0G2JND7 137 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 MTMR11A4FU01 709 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 DRGXA6NNA5 263 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 HAUS5O94927 633 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 MOCS2O96007 188 aaPredicted RBP13.8□□□□□ -0.2
SMG6-203ENST00000536871 COL6A2P12110 1019 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 TUFMP49411 452 aaKnown RBP13.8□□□□□ -0.2
SMG6-203ENST00000536871 PAPOLAP51003 745 aaKnown RBP13.8□□□□□ -0.2
SMG6-203ENST00000536871 BTG3Q14201 252 aaPredicted RBP13.8□□□□□ -0.2
SMG6-203ENST00000536871 CLNKQ7Z7G1 428 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 TBC1D1Q86TI0 1168 aaPredicted RBP13.8□□□□□ -0.2
SMG6-203ENST00000536871 NETO2Q8NC67 525 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 RDH11Q8TC12 318 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 PPP4R1Q8TF05 950 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 RANBP9Q96S59 729 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 TRIM56Q9BRZ2 755 aaKnown RBP13.8□□□□□ -0.2
SMG6-203ENST00000536871 TTPALQ9BTX7 342 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 RHOJQ9H4E5 214 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 SNX15Q9NRS6 342 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 MARCH5Q9NX47 278 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 MARCH2Q9P0N8 246 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 GGT7Q9UJ14 662 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 PLXNA3P51805 1871 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 SIN3BO75182 1162 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 USP12O75317 370 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 IGLV3-27P01718 113 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 SERPINE1P05121 402 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 ZDHHC11BP0C7U3 371 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 ADRA1AP35348 466 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 SLC11A1P49279 550 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 EFEMP1Q12805 493 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 MGAT5BQ3V5L5 792 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 FASTKD1Q53R41 847 aaKnown RBP13.8□□□□□ -0.2
SMG6-203ENST00000536871 MS4A13Q5J8X5 152 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 CERCAMQ5T4B2 595 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 N4BP2L1Q5TBK1 243 aaPredicted RBP13.8□□□□□ -0.2
SMG6-203ENST00000536871 PIK3R6Q5UE93 754 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 KIAA0408Q6ZU52 694 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 LMNTD2Q8IXW0 634 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 ZNF683Q8IZ20 524 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 CALML6Q8TD86 181 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 FAM167BQ9BTA0 163 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 TTLL2Q9BWV7 592 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 TMEM120AQ9BXJ8 343 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 ALG13Q9NP73 1137 aaKnown RBP13.8□□□□□ -0.2
SMG6-203ENST00000536871 DCTN4Q9UJW0 460 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 BACE2Q9Y5Z0 518 aa13.8□□□□□ -0.2
SMG6-203ENST00000536871 WFS1O76024 890 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 CXCL10P02778 98 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 GALTP07902 379 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 MYL4P12829 197 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 PTPN4P29074 926 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 KPNA2P52292 529 aaKnown RBP13.79□□□□□ -0.2
SMG6-203ENST00000536871 TAF1BQ53T94 588 aaPredicted RBP13.79□□□□□ -0.2
SMG6-203ENST00000536871 HSP90AA5PQ58FG0 334 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 C10orf120Q5SQS8 335 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 ARTNQ5T4W7 220 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 MARC1Q5VT66 337 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms