RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SEMA4GQ9NTN9 838 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 MPP6Q9NZW5 540 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 TBC1D14Q9P2M4 693 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 ICKQ9UPZ9 632 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 RABGAP1Q9Y3P9 1069 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 NCANO14594 1321 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 C17orf113A0A1B0GUU1 675 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 DPPA5A6NC42 116 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 AP3D1O14617 1153 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 ADAP00813 363 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 CD63P08962 238 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 TFEBP19484 476 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 FMO4P31512 558 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 RGS2P41220 211 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 DRG2P55039 364 aaKnown RBP5.79□□□□□ -1.48
PRKDC-208ENST00000536710 INHBCP55103 352 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 RPS3AP61247 264 aaKnown RBP5.79□□□□□ -1.48
PRKDC-208ENST00000536710 IL20RBQ6UXL0 311 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 NEK8Q86SG6 692 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 CCDC25Q86WR0 208 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 NME8Q8N427 588 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 ARL14EPQ8N8R7 260 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-208ENST00000536710 KLHL15Q96M94 604 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 NEUROD6Q96NK8 337 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 RANBP17Q9H2T7 1088 aaKnown RBP5.79□□□□□ -1.48
PRKDC-208ENST00000536710 BABAM1Q9NWV8 329 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 NLKQ9UBE8 527 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 PIAS3Q9Y6X2 628 aa5.79□□□□□ -1.48
PRKDC-208ENST00000536710 TARSL2A2RTX5 802 aaKnown RBP5.78□□□□□ -1.48
PRKDC-208ENST00000536710 A6NCN8 305 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 PABPN1LA6NDY0 278 aaKnown RBP5.78□□□□□ -1.48
PRKDC-208ENST00000536710 DOK2O60496 412 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 TACC1O75410 805 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 SCGB1D1O95968 90 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 GALTP07902 379 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 ACADMP11310 421 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 NFKBIAP25963 317 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 CIITAP33076 1130 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 GDF5P43026 501 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 RARSP54136 660 aaKnown RBP5.78□□□□□ -1.48
PRKDC-208ENST00000536710 SLC12A2P55011 1212 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 KLF10Q13118 480 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 MAMLD1Q13495 774 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 EIF4A2Q14240 407 aaKnown RBP5.78□□□□□ -1.48
PRKDC-208ENST00000536710 SNX30Q5VWJ9 437 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 SPATA1Q5VX52 437 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 FAM205BPQ63HN1 556 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 KLHL24Q6TFL4 600 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 CCDC129Q6ZRS4 1044 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 PXKQ7Z7A4 578 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 AMER2Q8N7J2 671 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 CCDC89Q8N998 374 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 MAP4K1Q92918 833 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 NR1H4Q96RI1 486 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-208ENST00000536710 PIP5K1AQ99755 562 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 TREX2Q9BQ50 279 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-208ENST00000536710 SCNM1Q9BWG6 230 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 HEMGNQ9BXL5 484 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 FRMD8Q9BZ67 464 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-208ENST00000536710 CXorf56Q9H5V9 222 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 MOV10Q9HCE1 1003 aaKnown RBP5.78□□□□□ -1.48
PRKDC-208ENST00000536710 HAUS2Q9NVX0 235 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 ZNHIT2Q9UHR6 403 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 PSAT1Q9Y617 370 aa5.78□□□□□ -1.48
PRKDC-208ENST00000536710 KDM3AQ9Y4C1 1321 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 ARHGAP10A1A4S6 786 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 NPIPB15A6NHN6 443 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-208ENST00000536710 LRRC3CA6NJW4 275 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 K7ENM7 598 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 CCNDBP1O95273 360 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 SERPINC1P01008 464 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 IGLV2-14P01704 120 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 POU1F1P28069 291 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 EIF3BP55884 814 aaKnown RBP5.77□□□□□ -1.49
PRKDC-208ENST00000536710 ZXDAP98168 799 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 PGM5Q15124 567 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 KIAA1755Q5JYT7 1200 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 MIS18BP1Q6P0N0 1132 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 C17orf99Q6UX52 265 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 ZNF813Q6ZN06 617 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 MOB3CQ70IA8 216 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 TADA2BQ86TJ2 420 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 FAM160B2Q86V87 743 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 PDILTQ8N807 584 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 FAR1Q8WVX9 515 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 KAT2AQ92830 837 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 ZNF419Q96HQ0 510 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-208ENST00000536710 TEFMQ96QE5 360 aaKnown RBP5.77□□□□□ -1.49
PRKDC-208ENST00000536710 BRF2Q9HAW0 419 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 ZNF304Q9HCX3 659 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 SNTG1Q9NSN8 517 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 ING1Q9UK53 422 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-208ENST00000536710 GPR34Q9UPC5 381 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 DMRT1Q9Y5R6 373 aa5.77□□□□□ -1.49
PRKDC-208ENST00000536710 KRTAP9-6A0A140TA67 174 aa5.76□□□□□ -1.49
PRKDC-208ENST00000536710 UGDHO60701 494 aa5.76□□□□□ -1.49
PRKDC-208ENST00000536710 DDAH2O95865 285 aa5.76□□□□□ -1.49
PRKDC-208ENST00000536710 FSHBP01225 129 aa5.76□□□□□ -1.49
PRKDC-208ENST00000536710 PSMA4P25789 261 aaKnown RBP5.76□□□□□ -1.49
PRKDC-208ENST00000536710 CLK3P49761 638 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms