RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PRR11Q96HE9 360 aaPredicted RBP6.14□□□□□ -1.43
CLIP1-207ENST00000536634 RIPOR3Q96MK2 946 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 EFHD1Q9BUP0 239 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 ZBTB26Q9HCK0 441 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 MAN2B2Q9Y2E5 1009 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 DCHS1Q96JQ0 3298 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 FANCIQ9NVI1 1328 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 DNAH14Q0VDD8 3507 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 WDR87Q6ZQQ6 2873 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 SMIM35A0A1B0GVV1 85 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 RASA4BC9J798 803 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 RASA4O43374 803 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 CBFA2T3O75081 653 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 CNMDO75829 334 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 KRT18P05783 430 aaKnown RBP6.13□□□□□ -1.43
CLIP1-207ENST00000536634 SFPQP23246 707 aaKnown RBP eCLIP6.13□□□□□ -1.43
CLIP1-207ENST00000536634 KELP23276 732 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 MST1P26927 711 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 MAPK4P31152 587 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 PBX1P40424 430 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 RHBDL3P58872 404 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 GPC5P78333 572 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 IRX3P78415 501 aaPredicted RBP6.13□□□□□ -1.43
CLIP1-207ENST00000536634 CFHR3Q02985 330 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 KCNB1Q14721 858 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 SEC23BQ15437 767 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 SLC35G1Q2M3R5 365 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 FAXCQ5TGI0 409 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 ANO1Q5XXA6 986 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 TMEM65Q6PI78 240 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 SLC2A7Q6PXP3 512 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 SLC39A5Q6ZMH5 540 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 DCDC5Q6ZRR9 648 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 GALNT16Q8N428 558 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 C12orf76Q8N812 135 aaPredicted RBP6.13□□□□□ -1.43
CLIP1-207ENST00000536634 ZNF778Q96MU6 729 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 WDR24Q96S15 920 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 PAGR1Q9BTK6 254 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 ZCWPW1Q9H0M4 648 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 OSBPL5Q9H0X9 879 aaPredicted RBP6.13□□□□□ -1.43
CLIP1-207ENST00000536634 SAP30LQ9HAJ7 183 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 USP29Q9HBJ7 922 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 FNIP2Q9P278 1114 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 KLHL13Q9P2N7 655 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 THEGQ9P2T0 379 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 PHTF1Q9UMS5 762 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 UTYO14607 1347 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 SALL1Q9NSC2 1324 aa6.13□□□□□ -1.43
CLIP1-207ENST00000536634 PRRC2BQ5JSZ5 2229 aaKnown RBP6.13□□□□□ -1.43
CLIP1-207ENST00000536634 MROH7-TTC4A0A0A0MT08 1334 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 SMCHD1A6NHR9 2005 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 TMEM232C9JQI7 657 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 H3BNC9 293 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 COQ9O75208 318 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 CDK4P11802 303 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 CYBAP13498 195 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 HOXA7P31268 230 aaPredicted RBP6.12□□□□□ -1.43
CLIP1-207ENST00000536634 ARHGAP25P42331 645 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 BTDP43251 543 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 RFX5P48382 616 aaPredicted RBP6.12□□□□□ -1.43
CLIP1-207ENST00000536634 BACE1P56817 501 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 ACOX1Q15067 660 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 ARL13BQ3SXY8 428 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 AASDHQ4L235 1098 aaPredicted RBP6.12□□□□□ -1.43
CLIP1-207ENST00000536634 DPP9Q86TI2 863 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 TXLNBQ8N3L3 684 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 OR2C3Q8N628 320 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.12□□□□□ -1.43
CLIP1-207ENST00000536634 GLIS1Q8NBF1 620 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 GBF1Q92538 1859 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 VPS50Q96JG6 964 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 HS6ST2Q96MM7 605 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 PCDHAC1Q9H158 963 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 VPS45Q9NRW7 570 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 GAR1Q9NY12 217 aaKnown RBP6.12□□□□□ -1.43
CLIP1-207ENST00000536634 RNF7Q9UBF6 113 aa6.12□□□□□ -1.43
CLIP1-207ENST00000536634 CDK5RAP2Q96SN8 1893 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 FAM234BA2RU67 622 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 CLIC1O00299 241 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 FGF18O76093 207 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 MBPP02686 304 aaPredicted RBP6.11□□□□□ -1.43
CLIP1-207ENST00000536634 MYL1P05976 194 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 PECAM1P16284 738 aaPredicted RBP6.11□□□□□ -1.43
CLIP1-207ENST00000536634 ADORA1P30542 326 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 MRPS5P82675 430 aaKnown RBP6.11□□□□□ -1.43
CLIP1-207ENST00000536634 TXNL4AP83876 142 aaKnown RBP6.11□□□□□ -1.43
CLIP1-207ENST00000536634 TLE2Q04725 743 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 MFSD13AQ14CX5 517 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 ARHGAP15Q53QZ3 475 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.11□□□□□ -1.43
CLIP1-207ENST00000536634 MFSD14CQ5VZR4 134 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 MRNIPQ6NTE8 343 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 USP17L6PQ6QN14 398 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 ATG9AQ7Z3C6 839 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 C11orf96Q7Z7L8 435 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 DZIP1Q86YF9 867 aaKnown RBP6.11□□□□□ -1.43
CLIP1-207ENST00000536634 P3H2Q8IVL5 708 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 CCDC150Q8NCX0 1101 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 SNX27Q96L92 541 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 SLC29A3Q9BZD2 475 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms