RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CFAP57Q96MR6 1250 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 SLC6A18Q96N87 628 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 RPRD1AQ96P16 312 aaPredicted RBP12.78□□□□□ -0.36
PRKDC-207ENST00000536483 FEM1AQ9BSK4 669 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 ACE2Q9BYF1 805 aaPredicted RBP12.78□□□□□ -0.36
PRKDC-207ENST00000536483 OSBPL2Q9H1P3 480 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 NEUROG2Q9H2A3 272 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 EBF2Q9HAK2 575 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 CBX8Q9HC52 389 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 PPARGC1AQ9UBK2 798 aaKnown RBP12.78□□□□□ -0.36
PRKDC-207ENST00000536483 DKK4Q9UBT3 224 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 ZNF212Q9UDV6 495 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 SCML1Q9UN30 329 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 KNTC1P50748 2209 aa12.77□□□□□ -0.36
PRKDC-207ENST00000536483 ASXL3Q9C0F0 2248 aa12.77□□□□□ -0.36
PRKDC-207ENST00000536483 SYNJ2BP-COX16A0A087WUM0 186 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-207ENST00000536483 A0A1W2PP55 124 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 VILLO15195 856 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 MID1O15344 667 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 ATP9BO43861 1147 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 RNASEH1O60930 286 aaKnown RBP12.77□□□□□ -0.37
PRKDC-207ENST00000536483 KRT3P12035 628 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 GZMAP12544 262 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 PDGFRAP16234 1089 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 ADRA1BP35368 520 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 CTSOP43234 321 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-207ENST00000536483 IRAK1P51617 712 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 RACK1P63244 317 aaKnown RBP12.77□□□□□ -0.37
PRKDC-207ENST00000536483 ZNF177Q13360 481 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-207ENST00000536483 MANEALQ5VSG8 457 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 ACAD10Q6JQN1 1059 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 NCEH1Q6PIU2 408 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 ZNF783Q6ZMS7 281 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 GATAD2AQ86YP4 633 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 MMAAQ8IVH4 418 aaKnown RBP12.77□□□□□ -0.37
PRKDC-207ENST00000536483 FRS2Q8WU20 508 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 RXFP2Q8WXD0 754 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 PTPRN2Q92932 1015 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 NTAN1Q96AB6 310 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 FAM131CQ96AQ9 280 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 IQCDQ96DY2 449 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 FAM129BQ96TA1 746 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 C11orf70Q9BRQ4 267 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.37
PRKDC-207ENST00000536483 COX16Q9P0S2 106 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 FTSJ1Q9UET6 329 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 VANGL2Q9ULK5 521 aa12.77□□□□□ -0.37
PRKDC-207ENST00000536483 A0A1B0GTQ1 180 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 EDDM13A0A1B0GTR0 161 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 A0A1W2PQJ5 194 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 TTC34A8MYJ7 566 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 DFNA5O60443 496 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 RNASEH2AO75792 299 aaKnown RBP12.76□□□□□ -0.37
PRKDC-207ENST00000536483 WNT1P04628 370 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 MZF1P28698 734 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-207ENST00000536483 SDC4P31431 198 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 SLC8A1P32418 973 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 RFC1P35251 1148 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-207ENST00000536483 CST6Q15828 149 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 INAVAQ3KP66 663 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 WDR59Q6PJI9 974 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 LRRC31Q6UY01 552 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 MCOLN2Q8IZK6 566 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 EMC1Q8N766 993 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 OR52K2Q8NGK3 314 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 JOSD2Q8TAC2 188 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 SYN2Q92777 582 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-207ENST00000536483 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-207ENST00000536483 OMDQ99983 421 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 SIK2Q9H0K1 926 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 SCUBE2Q9NQ36 999 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 AASDHPPTQ9NRN7 309 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 ADAMTS1Q9UHI8 967 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 HS3ST2Q9Y278 367 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 IGSF10Q6WRI0 2623 aa12.76□□□□□ -0.37
PRKDC-207ENST00000536483 ILVBLA1L0T0 632 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 LRRC72A6NJI9 287 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 LRRC53A6NM62 1247 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 E9PAM4 449 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 CBX4O00257 560 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 WNT9AO14904 365 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 CNTN5O94779 1100 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 ZNF143P52747 638 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-207ENST00000536483 AIF1P55008 147 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 HDAC4P56524 1084 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 CLDN6P56747 220 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 TPM4P67936 248 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 FANCCQ00597 558 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 SFSWAPQ12872 951 aaKnown RBP12.75□□□□□ -0.37
PRKDC-207ENST00000536483 SHBQ15464 509 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 ZSCAN23Q3MJ62 389 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 ALFQ53S48 1182 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 PLEKHA7Q6IQ23 1121 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 LUZP1Q86V48 1076 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 CIR1Q86X95 450 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-207ENST00000536483 PDCD7Q8N8D1 485 aaKnown RBP12.75□□□□□ -0.37
PRKDC-207ENST00000536483 OR2T34Q8NGX1 318 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms