RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 ZNF333Q96JL9 665 aa3.19□□□□□ -1.9
BRCA2-205ENST00000533776 DUX5Q96PT3 197 aa3.19□□□□□ -1.9
BRCA2-205ENST00000533776 DDX31Q9H8H2 851 aaKnown RBP3.19□□□□□ -1.9
BRCA2-205ENST00000533776 CERS4Q9HA82 394 aa3.19□□□□□ -1.9
BRCA2-205ENST00000533776 Q9N2J8 555 aa3.19□□□□□ -1.9
BRCA2-205ENST00000533776 TCF7L2Q9NQB0 619 aa3.19□□□□□ -1.9
BRCA2-205ENST00000533776 GEMIN8Q9NWZ8 242 aaKnown RBP3.19□□□□□ -1.9
BRCA2-205ENST00000533776 IL36RNQ9UBH0 155 aa3.19□□□□□ -1.9
BRCA2-205ENST00000533776 SRPRBQ9Y5M8 271 aaKnown RBP3.19□□□□□ -1.9
BRCA2-205ENST00000533776 RAI2Q9Y5P3 530 aa3.19□□□□□ -1.9
BRCA2-205ENST00000533776 MBD3L5A6NJ08 208 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-205ENST00000533776 ASNA1O43681 348 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 SNRNP70P08621 437 aaKnown RBP3.18□□□□□ -1.9
BRCA2-205ENST00000533776 NBPF7P0C2Y1 421 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-205ENST00000533776 CDH12P55289 794 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 TBX4P57082 545 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 BNC1Q01954 994 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 POU3F1Q03052 451 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-205ENST00000533776 PKP1Q13835 747 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 PLK5Q496M5 336 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 IZUMO3Q5VZ72 239 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 IL31Q6EBC2 164 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 RETSATQ6NUM9 610 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 VPS52Q8N1B4 723 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 MUC20Q8N307 709 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-205ENST00000533776 ENDOVQ8N8Q3 282 aaKnown RBP3.18□□□□□ -1.9
BRCA2-205ENST00000533776 NEXN-AS1Q8NBZ9 246 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 SLC35F5Q8WV83 523 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 MUL1Q969V5 352 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 KIAA1191Q96A73 305 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 GFM1Q96RP9 751 aaKnown RBP3.18□□□□□ -1.9
BRCA2-205ENST00000533776 NODALQ96S42 347 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 STK33Q9BYT3 514 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 SPRY4Q9C004 299 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 CNTN6Q9UQ52 1028 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 PCDHA10Q9Y5I2 948 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 NOTCH3Q9UM47 2321 aa3.18□□□□□ -1.9
BRCA2-205ENST00000533776 SERPINI2O75830 405 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 SOX30O94993 753 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 LARGE1O95461 756 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 CLDN7O95471 211 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 IGLV2-11P01706 119 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 HOXB9P17482 250 aaPredicted RBP3.17□□□□□ -1.9
BRCA2-205ENST00000533776 PRPH2P23942 346 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 TYK2P29597 1187 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 NEK3P51956 506 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 OAZ1P54368 228 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 HLTFQ14527 1009 aaKnown RBP eCLIP3.17□□□□□ -1.9
BRCA2-205ENST00000533776 ZRSR1Q15695 479 aaKnown RBP3.17□□□□□ -1.9
BRCA2-205ENST00000533776 VWA5B1Q5TIE3 1220 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 MON1BQ7L1V2 547 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 GATAD2AQ86YP4 633 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 TCP11L2Q8N4U5 519 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 LILRB1Q8NHL6 650 aaPredicted RBP3.17□□□□□ -1.9
BRCA2-205ENST00000533776 ADGRG7Q96K78 797 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 PKP4Q99569 1192 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 IL25Q9H293 177 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 TP63Q9H3D4 680 aaPredicted RBP3.17□□□□□ -1.9
BRCA2-205ENST00000533776 ARNT2Q9HBZ2 717 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 PDE11AQ9HCR9 933 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 TMEM248Q9NWD8 314 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 DONSONQ9NYP3 566 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 LZTS1Q9Y250 596 aa3.17□□□□□ -1.9
BRCA2-205ENST00000533776 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 IGLV5-52A0A0A0MRZ9 124 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 ANO9A1A5B4 782 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 FAM90A18PA6NE21 464 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 FAM90A16PA6NEW6 464 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 AQP12BA6NM10 295 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 FAM90A9PA6NNJ1 464 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 FAM90A5PA8MXJ8 464 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 GRM8O00222 908 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 HSPB6O14558 160 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 ITM2AO43736 263 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 PLA2G6O60733 806 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 KRT36O76013 467 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 MYL1P05976 194 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 F7P08709 466 aaPredicted RBP3.16□□□□□ -1.9
BRCA2-205ENST00000533776 HMGB1P09429 215 aaKnown RBP3.16□□□□□ -1.9
BRCA2-205ENST00000533776 FAM90A15PP0C7V4 464 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 FAM90A14PP0C7W9 464 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 MYZAPP0CAP1 466 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 PRKCHP24723 683 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 GSTM2P28161 218 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 C21orf33P30042 268 aaPredicted RBP3.16□□□□□ -1.9
BRCA2-205ENST00000533776 RFC1P35251 1148 aaPredicted RBP3.16□□□□□ -1.9
BRCA2-205ENST00000533776 TM4SF4P48230 202 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 PCP4P48539 62 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 MYBPC2Q14324 1141 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 MTFR2Q6P444 385 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 MEX3BQ6ZN04 569 aaKnown RBP3.16□□□□□ -1.9
BRCA2-205ENST00000533776 RFLNBQ8N5W9 214 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 KCNJ9Q92806 393 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 TXNDC15Q96J42 360 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 IFT27Q9BW83 186 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 TRIM31Q9BZY9 425 aa3.16□□□□□ -1.9
BRCA2-205ENST00000533776 SEPSECSQ9HD40 501 aaKnown RBP3.16□□□□□ -1.9
BRCA2-205ENST00000533776 LIN7CQ9NUP9 197 aaKnown RBP3.16□□□□□ -1.9
BRCA2-205ENST00000533776 IGHV4-28A0A0C4DH34 117 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms