RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 RAPGEF1Q13905 1077 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 ZNF484Q5JVG2 852 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 FBXO47Q5MNV8 452 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 ASPHD1Q5U4P2 390 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 NUGGCQ68CJ6 796 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 NCAPH2Q6IBW4 605 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 ZNF549Q6P9A3 640 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 GPSM1Q86YR5 675 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 TMC8Q8IU68 726 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 CMASQ8NFW8 434 aaPredicted RBP2.95□□□□□ -1.94
ATM-220ENST00000533526 INPP5DQ92835 1189 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 MASTLQ96GX5 879 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 NTPCRQ9BSD7 190 aaKnown RBP2.95□□□□□ -1.94
ATM-220ENST00000533526 FRMD8Q9BZ67 464 aaPredicted RBP2.95□□□□□ -1.94
ATM-220ENST00000533526 B3GNT4Q9C0J1 378 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 FBXO40Q9UH90 709 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 FEM1BQ9UK73 627 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 ICKQ9UPZ9 632 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 OSGIN2Q9Y236 505 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 RRP7AQ9Y3A4 280 aaKnown RBP2.95□□□□□ -1.94
ATM-220ENST00000533526 RAP2CQ9Y3L5 183 aa2.95□□□□□ -1.94
ATM-220ENST00000533526 MORC2Q9Y6X9 1032 aaPredicted RBP2.95□□□□□ -1.94
ATM-220ENST00000533526 OR6C68A6NDL8 312 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 B9A039 149 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 STMND1H3BQB6 276 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 ANP32CO43423 234 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 TSPAN3O60637 253 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 DDAH2O95865 285 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 ALPLP05186 524 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 MMP3P08254 477 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 CSF1P09603 554 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 LYL1P12980 280 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 HSD3B1P14060 373 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 CHRNB2P17787 502 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 RXRAP19793 462 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 AVPR2P30518 371 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 HOXD3P31249 432 aaPredicted RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 MLH1P40692 756 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 CCT5P48643 541 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 ENTPD1P49961 510 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 LINC00205P59089 165 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 ZP1P60852 638 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 TBL3Q12788 808 aaKnown RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 BYSLQ13895 437 aaKnown RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 TAF5Q15542 800 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 OTUD1Q5VV17 481 aaPredicted RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 DCAF12L2Q5VW00 463 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 RNF144BQ7Z419 303 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 SERPINA11Q86U17 422 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 WDR5BQ86VZ2 330 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 C2CD5Q86YS7 1000 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 ANKRD18AQ8IVF6 992 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 HERC6Q8IVU3 1022 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 ANKRD42Q8N9B4 389 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 C7orf57Q8NEG2 295 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 RBM17Q96I25 401 aaKnown RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 MARK4Q96L34 752 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 ZSCAN31Q96LW9 406 aaPredicted RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 WDR77Q9BQA1 342 aaPredicted RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 PYM1Q9BRP8 204 aaKnown RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 NPLQ9BXD5 320 aaPredicted RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 CATSPERBQ9H7T0 1116 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 RMI1Q9H9A7 625 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 PLAC1Q9HBJ0 212 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 KRCC1Q9NPI7 259 aaPredicted RBP2.94□□□□□ -1.94
ATM-220ENST00000533526 GRHL1Q9NZI5 618 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 SEL1LQ9UBV2 794 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 CD207Q9UJ71 328 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 CDH22Q9UJ99 828 aa2.94□□□□□ -1.94
ATM-220ENST00000533526 OR6C75A6NL08 312 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 MS4A18H0YCH9 400 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 STX16-NPEPL1H3BU86 382 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 HSPB6O14558 160 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 STX16O14662 325 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 TNFRSF13BO14836 293 aaPredicted RBP2.93□□□□□ -1.94
ATM-220ENST00000533526 IKBKBO14920 756 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 HBP1O60381 514 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 CNPP09543 421 aaKnown RBP2.93□□□□□ -1.94
ATM-220ENST00000533526 HOXC6P09630 235 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 UNGP13051 313 aaPredicted RBP2.93□□□□□ -1.94
ATM-220ENST00000533526 HOXB2P14652 356 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 CPA1P15085 419 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 ITGB6P18564 788 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 YWHAQP27348 245 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 CCKARP32238 428 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 RFC1P35251 1148 aaPredicted RBP2.93□□□□□ -1.94
ATM-220ENST00000533526 AVPR1AP37288 418 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 CDKN2AP42771 156 aaKnown RBP2.93□□□□□ -1.94
ATM-220ENST00000533526 GPR12P47775 334 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 MTNR1AP48039 350 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 DSC1Q08554 894 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 TRAF2Q12933 501 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 ZRSR2Q15696 482 aaKnown RBP2.93□□□□□ -1.94
ATM-220ENST00000533526 DUSP6Q16828 381 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 DNTTIP2Q5QJE6 756 aaKnown RBP2.93□□□□□ -1.94
ATM-220ENST00000533526 HEPHL1Q6MZM0 1159 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 GJB7Q6PEY0 223 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 LDHAL6AQ6ZMR3 332 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 PELI3Q8N2H9 469 aa2.93□□□□□ -1.94
ATM-220ENST00000533526 IQCF1Q8N6M8 205 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms