RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 SCYL2Q6P3W7 929 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 CNGA4Q8IV77 575 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 PCDH20Q8N6Y1 951 aaKnown RBP10.06□□□□□ -0.8
NUP98-220ENST00000533346 C12orf50Q8NA57 414 aaPredicted RBP10.06□□□□□ -0.8
NUP98-220ENST00000533346 OR2A12Q8NGT7 310 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 TEKT4Q8WW24 435 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 OR8D1Q8WZ84 308 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 LRIG1Q96JA1 1093 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 CCDC114Q96M63 670 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 EPAS1Q99814 870 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 ORAI3Q9BRQ5 295 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 GPR174Q9BXC1 333 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 ZDHHC5Q9C0B5 715 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 THAP2Q9H0W7 228 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 MTG2Q9H4K7 406 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 NOL6Q9H6R4 1146 aaKnown RBP10.06□□□□□ -0.8
NUP98-220ENST00000533346 LRRC19Q9H756 370 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 ATP13A1Q9HD20 1204 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 ABHD10Q9NUJ1 306 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 UVRAGQ9P2Y5 699 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 IP6K2Q9UHH9 426 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 CACNA1BQ00975 2339 aa10.06□□□□□ -0.8
NUP98-220ENST00000533346 ADAMTS9Q9P2N4 1935 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 A0A1B0GTW7 788 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 LNP1A1A4G5 178 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 FAM170AA1A519 330 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 UPK3BL1B0FP48 263 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 UPK3BL2E5RIL1 263 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 C1QTNF3-AMACRE9PGA6 284 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 CDX4O14627 284 aaPredicted RBP10.05□□□□□ -0.8
NUP98-220ENST00000533346 SNAP91O60641 907 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 RAMP2O60895 175 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 SEMA4FO95754 770 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 TPM1P09493 284 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 H2AFZP0C0S5 128 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 GNSP15586 552 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 EPHB2P29323 1055 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 NUDT1P36639 197 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 EIF4A3P38919 411 aaKnown RBP10.05□□□□□ -0.8
NUP98-220ENST00000533346 CCR5P51681 352 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 GALCP54803 685 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 IRX4P78413 519 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 CCDC15Q0P6D6 951 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 POLD3Q15054 466 aaPredicted RBP10.05□□□□□ -0.8
NUP98-220ENST00000533346 SF3A2Q15428 464 aaKnown RBP10.05□□□□□ -0.8
NUP98-220ENST00000533346 PARP15Q460N3 678 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 TRIM61Q5EBN2 209 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 CCDC122Q5T0U0 273 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 DCAF12L1Q5VU92 463 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 AFMIDQ63HM1 303 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 NEK5Q6P3R8 708 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 H2AFVQ71UI9 128 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 TFAP2DQ7Z6R9 452 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 MMAAQ8IVH4 418 aaKnown RBP10.05□□□□□ -0.8
NUP98-220ENST00000533346 PYROXD2Q8N2H3 581 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 STK40Q8N2I9 435 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 AADATQ8N5Z0 425 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 ATP11CQ8NB49 1132 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 RNF214Q8ND24 703 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 OR7D4Q8NG98 312 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 OR2T34Q8NGX1 318 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 PIGKQ92643 395 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 VOPP1Q96AW1 172 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 MRFAP1L1Q96HT8 127 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 HSPA12BQ96MM6 686 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 CNTNAP3BQ96NU0 1288 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 PEBP4Q96S96 227 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.05□□□□□ -0.8
NUP98-220ENST00000533346 SNRNP25Q9BV90 132 aaKnown RBP10.05□□□□□ -0.8
NUP98-220ENST00000533346 NUSAP1Q9BXS6 441 aaKnown RBP10.05□□□□□ -0.8
NUP98-220ENST00000533346 CNTNAP3Q9BZ76 1288 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 KLC2Q9H0B6 622 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 NEUROG2Q9H2A3 272 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 RXFP3Q9NSD7 469 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 FBXL12Q9NXK8 326 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 INTUQ9ULD6 942 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 AP4E1Q9UPM8 1137 aa10.05□□□□□ -0.8
NUP98-220ENST00000533346 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.05□□□□□ -0.8
NUP98-220ENST00000533346 FARP1Q9Y4F1 1045 aaPredicted RBP10.05□□□□□ -0.8
NUP98-220ENST00000533346 PLXNA2O75051 1894 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 EPG5Q9HCE0 2579 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.04□□□□□ -0.8
NUP98-220ENST00000533346 MYO1FO00160 1098 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 MID1O15344 667 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 ATMINO43313 823 aaPredicted RBP10.04□□□□□ -0.8
NUP98-220ENST00000533346 SMAD6O43541 496 aaKnown RBP10.04□□□□□ -0.8
NUP98-220ENST00000533346 LATO43561 262 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 PLRG1O43660 514 aaKnown RBP10.04□□□□□ -0.8
NUP98-220ENST00000533346 PRPSAP2O60256 369 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 GDF9O60383 454 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 MTA2O94776 668 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 LCA5LO95447 670 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 GSRP00390 522 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 PRNPP04156 253 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 IGHV4-34P06331 123 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 SYPP08247 313 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 TMEM253P0C7T8 217 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 VAV1P15498 845 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 GLDCP23378 1020 aa10.04□□□□□ -0.8
NUP98-220ENST00000533346 CD27P26842 260 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms