RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 FGF1P05230 155 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 THRAP10827 490 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 MS4A1P11836 297 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 CYLC1P35663 651 aaPredicted RBP1.78□□□□□ -2.13
KNL1-211ENST00000533001 CXCR3P49682 368 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 TAF6P49848 677 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 C19orf57Q0VDD7 668 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 PTPN20Q4JDL3 420 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 AASDHQ4L235 1098 aaPredicted RBP1.78□□□□□ -2.13
KNL1-211ENST00000533001 TTC38Q5R3I4 469 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 L1TD1Q5T7N2 865 aaKnown RBP1.78□□□□□ -2.13
KNL1-211ENST00000533001 PLPP6Q8IY26 295 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 NUP93Q8N1F7 819 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 XXYLT1Q8NBI6 393 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 GPBAR1Q8TDU6 330 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 DQX1Q8TE96 717 aaKnown RBP1.78□□□□□ -2.13
KNL1-211ENST00000533001 ACDQ96AP0 544 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 ZNF578Q96N58 590 aaPredicted RBP1.78□□□□□ -2.13
KNL1-211ENST00000533001 LLPHQ9BRT6 129 aaKnown RBP1.78□□□□□ -2.13
KNL1-211ENST00000533001 FEM1AQ9BSK4 669 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 FRMD8Q9BZ67 464 aaPredicted RBP1.78□□□□□ -2.13
KNL1-211ENST00000533001 GOLPH3LQ9H4A5 285 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 SLC38A7Q9NVC3 462 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 EVA1BQ9NVM1 165 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 SLC23A2Q9UGH3 650 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 SUN2Q9UH99 717 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 NOCTQ9UK39 431 aaKnown RBP1.78□□□□□ -2.13
KNL1-211ENST00000533001 GMEB2Q9UKD1 530 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 PCDHB5Q9Y5E4 795 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 M0QZ92 97 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 PRRG1O14668 218 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 YY2O15391 372 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 NKX2-8O15522 239 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SNAP91O60641 907 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 LATS1O95835 1130 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 MMP12P39900 470 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 CSKP41240 450 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 RPL10AP62906 217 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 TMEM132DQ14C87 1099 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SNRNP35Q16560 246 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 MEA1Q16626 185 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SPRED1Q7Z699 444 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 WDR49Q8IV35 697 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 TRIM59Q8IWR1 403 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 CD302Q8IX05 232 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 DTWD1Q8N5C7 304 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 ITLN2Q8WWU7 325 aaPredicted RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 HVCN1Q96D96 273 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 ABHD17AQ96GS6 310 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SLC45A3Q96JT2 553 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 DUSP16Q9BY84 665 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 KMT5AQ9NQR1 393 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 TOMM22Q9NS69 142 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 TNFRSF10DQ9UBN6 386 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 AGAP1Q9UPQ3 857 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 DTX4Q9Y2E6 619 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SNX9Q9Y5X1 595 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 IGHV5-10-1A0A0J9YXX1 117 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 ENC1O14682 589 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 IKBKBO14920 756 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 NCAM2O15394 837 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 ERLIN2O94905 339 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 HMGB1P09429 215 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 CHRNB2P17787 502 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 TNFRSF8P28908 595 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 MCM4P33991 863 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 FLT3P36888 993 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 IL9RQ01113 521 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 NRG1Q02297 640 aaPredicted RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 CENPCQ03188 943 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 C10orf76Q5T2E6 689 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 BSPRYQ5W0U4 402 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 ADGRD1Q6QNK2 874 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 IGFL3Q6UXB1 125 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 DPY19L3Q6ZPD9 716 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SEM1Q6ZVN7 128 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 TAC4Q86UU9 113 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 NLRP8Q86W28 1048 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SHC3Q92529 594 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 HPDLQ96IR7 371 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 COQ10AQ96MF6 247 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 FAM193BQ96PV7 902 aaPredicted RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 CGRRF1Q99675 332 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 FAM124BQ9H5Z6 455 aaPredicted RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 PRDM16Q9HAZ2 1276 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 ARHGEF38Q9NXL2 777 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 RCOR1Q9UKL0 485 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SATB2Q9UPW6 733 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SNX10Q9Y5X0 201 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SEMA4FO95754 770 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 RECKO95980 971 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 IGHA1P01876 353 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 C9P02748 559 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 CD38P28907 300 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 GKP32189 559 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 DUSP3P51452 185 aaPredicted RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 DSC2Q02487 901 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 KDSRQ06136 332 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 ELAVL3Q14576 367 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 MDH1BQ5I0G3 518 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms