RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 AGPAT1Q99943 283 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 ZDHHC5Q9C0B5 715 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 SLC32A1Q9H598 525 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 OSGEPQ9NPF4 335 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 ADAM22Q9P0K1 906 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 PCOLCE2Q9UKZ9 415 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 CA5BQ9Y2D0 317 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 PLXNB3Q9ULL4 1909 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 EPG5Q9HCE0 2579 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 A0A1W2PR77 199 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 MCF2LO15068 1137 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 CCP110O43303 1012 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 OR1E1P30953 314 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 ADRA1BP35368 520 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 PTPN9P43378 593 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 GSCP56915 257 aaPredicted RBP18.23■□□□□ 0.51
SMG1-203ENST00000532700 SLC14A1Q13336 389 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 SHBQ15464 509 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 TRIM72Q6ZMU5 477 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 SETD3Q86TU7 594 aaPredicted RBP18.23■□□□□ 0.51
SMG1-203ENST00000532700 SLCO6A1Q86UG4 719 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 NLRP14Q86W24 1093 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 MSANTD4Q8NCY6 345 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 FAM172AQ8WUF8 416 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 OR8D1Q8WZ84 308 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 ZYG11BQ9C0D3 744 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 RTN4Q9NQC3 1192 aaKnown RBP18.23■□□□□ 0.51
SMG1-203ENST00000532700 ARHGAP20Q9P2F6 1191 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 CEP295Q9C0D2 2601 aa18.23■□□□□ 0.51
SMG1-203ENST00000532700 KNL1Q8NG31 2342 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 ATMINO43313 823 aaPredicted RBP18.22■□□□□ 0.51
SMG1-203ENST00000532700 PLRG1O43660 514 aaKnown RBP18.22■□□□□ 0.51
SMG1-203ENST00000532700 CER1O95813 267 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 MAT2AP31153 395 aaKnown RBP18.22■□□□□ 0.51
SMG1-203ENST00000532700 SDC4P31431 198 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 NNMTP40261 264 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 NSFP46459 744 aaKnown RBP18.22■□□□□ 0.51
SMG1-203ENST00000532700 OXCT1P55809 520 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 MTA1Q13330 715 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 IQCB1Q15051 598 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 TRIP6Q15654 476 aaKnown RBP18.22■□□□□ 0.51
SMG1-203ENST00000532700 PPP1R15BQ5SWA1 713 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 PIP5KL1Q5T9C9 394 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 C22orf39Q6P5X5 142 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 LRRC31Q6UY01 552 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 LEKR1Q6ZMV7 388 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 DBX2Q6ZNG2 339 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 CHCHD4Q8N4Q1 142 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 ATP11CQ8NB49 1132 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 NETO2Q8NC67 525 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 GATA6Q92908 595 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 SEPT11Q9NVA2 429 aaKnown RBP18.22■□□□□ 0.51
SMG1-203ENST00000532700 TOR4AQ9NXH8 423 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 OR12D3Q9UGF7 316 aa18.22■□□□□ 0.51
SMG1-203ENST00000532700 LRRC72A6NJI9 287 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 LRRC53A6NM62 1247 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 CBX4O00257 560 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 LATO43561 262 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 LRIG2O94898 1065 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 KRT3P12035 628 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 GPD1P21695 349 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 CCR5P51681 352 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 GNA12Q03113 381 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 ST3GAL2Q16842 350 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 ZNF423Q2M1K9 1284 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 C3orf20Q8ND61 904 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 GRIN3AQ8TCU5 1115 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 MCEEQ96PE7 176 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 SPON2Q9BUD6 331 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 C2orf49Q9BVC5 232 aaPredicted RBP18.21■□□□□ 0.51
SMG1-203ENST00000532700 KLC2Q9H0B6 622 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 NOL6Q9H6R4 1146 aaKnown RBP18.21■□□□□ 0.51
SMG1-203ENST00000532700 DNAI1Q9UI46 699 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 FCF1Q9Y324 198 aaKnown RBP18.21■□□□□ 0.51
SMG1-203ENST00000532700 DAAM1Q9Y4D1 1078 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 WASF2Q9Y6W5 498 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 ZFHX4Q86UP3 3567 aa18.21■□□□□ 0.51
SMG1-203ENST00000532700 TBC1D3DA0A087WVF3 549 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D3IA0A087WXS9 549 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D3EA0A087X179 549 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D3KA0A087X1G2 549 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 ILVBLA1L0T0 632 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D3FA6NER0 549 aaPredicted RBP18.2■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D3LB9A6J9 549 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D3HP0C7X1 549 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 FTH1P19P0C7X4 201 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 ZNF883P0CG24 379 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 GKP32189 559 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 CHRNA3P32297 505 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 RACK1P63244 317 aaKnown RBP18.2■□□□□ 0.5
SMG1-203ENST00000532700 TPM4P67936 248 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 C6orf118Q5T5N4 469 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D3GQ6DHY5 549 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D3CQ6IPX1 549 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 DPY19L3Q6ZPD9 716 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 STRADAQ7RTN6 431 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 MARCH9Q86YJ5 346 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 GATAD2AQ86YP4 633 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 MCOLN2Q8IZK6 566 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D3Q8IZP1 549 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms