RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 EPHA8P29322 1005 aaPredicted RBP17.23■□□□□ 0.35
CPSF1-207ENST00000531727 OR1E1P30953 314 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 ARRB1P49407 418 aaPredicted RBP17.23■□□□□ 0.35
CPSF1-207ENST00000531727 CLCN6P51797 869 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 SMAD1Q15797 465 aaKnown RBP17.23■□□□□ 0.35
CPSF1-207ENST00000531727 CCDC157Q569K6 752 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 C6orf118Q5T5N4 469 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 NAA35Q5VZE5 725 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 ARCQ7LC44 396 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 TFAP2DQ7Z6R9 452 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 ZNF677Q86XU0 584 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 OR2A12Q8NGT7 310 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 CFAP57Q96MR6 1250 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 GANQ9H2C0 597 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 PRAMEF26H0Y7S4 382 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 ENC1O14682 589 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 SMAD6O43541 496 aaKnown RBP17.22■□□□□ 0.35
CPSF1-207ENST00000531727 CHRNA3P32297 505 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 RXRGP48443 463 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 TAS2R38P59533 333 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 OVGP1Q12889 678 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 SETMARQ53H47 684 aaPredicted RBP17.22■□□□□ 0.35
CPSF1-207ENST00000531727 PIP5KL1Q5T9C9 394 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 DHRS13Q6UX07 377 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 LINGO4Q6UY18 593 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 ZNF783Q6ZMS7 281 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 SPATS2Q86XZ4 545 aaKnown RBP17.22■□□□□ 0.35
CPSF1-207ENST00000531727 TMIEQ8NEW7 156 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 MDM1Q8TC05 714 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 ENOX1Q8TC92 643 aaKnown RBP17.22■□□□□ 0.35
CPSF1-207ENST00000531727 CNDP2Q96KP4 475 aaKnown RBP17.22■□□□□ 0.35
CPSF1-207ENST00000531727 ZNF212Q9UDV6 495 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 NOCTQ9UK39 431 aaKnown RBP17.22■□□□□ 0.35
CPSF1-207ENST00000531727 PCDHGA1Q9Y5H4 931 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 CABIN1Q9Y6J0 2220 aa17.22■□□□□ 0.35
CPSF1-207ENST00000531727 ILVBLA1L0T0 632 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 KPNA3O00505 521 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-207ENST00000531727 MAGEC1O60732 1142 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 RNGTTO60942 597 aaKnown RBP17.21■□□□□ 0.35
CPSF1-207ENST00000531727 SRGAP2O75044 1071 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 ENDOD1O94919 500 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 LDOC1O95751 146 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-207ENST00000531727 PRNPP04156 253 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 GLDCP23378 1020 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 CCDC15Q0P6D6 951 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 STAT4Q14765 748 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 CDKAL1Q5VV42 579 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 NEK5Q6P3R8 708 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 C22orf39Q6P5X5 142 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 FAM131BQ86XD5 332 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 MARCH9Q86YJ5 346 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 EID2Q8N6I1 236 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 CHST14Q8NCH0 376 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 OR7D4Q8NG98 312 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 SLC20A1Q8WUM9 679 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 ARRDC3Q96B67 414 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 ZYG11BQ9C0D3 744 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 VPS16Q9H269 839 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 DYRK4Q9NR20 520 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 METTL5Q9NRN9 209 aaKnown RBP17.21■□□□□ 0.35
CPSF1-207ENST00000531727 DKK4Q9UBT3 224 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 LHX6Q9UPM6 363 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 KNL1Q8NG31 2342 aa17.21■□□□□ 0.35
CPSF1-207ENST00000531727 FAM149AA5PLN7 773 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 CBX4O00257 560 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 GFPT2O94808 682 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 CYP1A1P04798 512 aaPredicted RBP17.2■□□□□ 0.34
CPSF1-207ENST00000531727 KLK7P49862 253 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 CDR2Q01850 454 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 BNIP3Q12983 259 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 CAMK2BQ13554 666 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 KRT31Q15323 416 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 SFMBT2Q5VUG0 894 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 CLEC17AQ6ZS10 378 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 KANSL1Q7Z3B3 1105 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 EMC1Q8N766 993 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 SPON2Q9BUD6 331 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 TNKS2Q9H2K2 1166 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 LMBRD1Q9NUN5 540 aa17.2■□□□□ 0.34
CPSF1-207ENST00000531727 PPARGC1AQ9UBK2 798 aaKnown RBP17.2■□□□□ 0.34
CPSF1-207ENST00000531727 A0A1W2PQU0 124 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 TRABD2BA6NFA1 517 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 ZMPSTE24O75844 475 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 TPM2P07951 284 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 C1SP09871 688 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 CHRNB2P17787 502 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 MMP8P22894 467 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 SOX5P35711 763 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 RECQLP46063 649 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-207ENST00000531727 SERPINH1P50454 418 aaKnown RBP17.19■□□□□ 0.34
CPSF1-207ENST00000531727 JAM2P57087 298 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 POLR2FP61218 127 aaKnown RBP17.19■□□□□ 0.34
CPSF1-207ENST00000531727 ATP11AP98196 1134 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 FMO1Q01740 532 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 GNA12Q03113 381 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 SLC20A2Q08357 652 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 DNAJC3Q13217 504 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 ARSIQ5FYB1 569 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 FKBP15Q5T1M5 1219 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 RETSATQ6NUM9 610 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms