RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ANXA6P08133 673 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 MYZAPP0CAP1 466 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 HARSP12081 509 aaKnown RBP4.72□□□□□ -1.65
PTPRK-220ENST00000531466 PRIM2P49643 509 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 KRTAP10-3P60369 221 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 ST3GAL1Q11201 340 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 HDAC1Q13547 482 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-220ENST00000531466 PMS2P11Q13670 270 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 MYBPC2Q14324 1141 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 ARL13BQ3SXY8 428 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 EFHC1Q5JVL4 640 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 NAGSQ8N159 534 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 NEK9Q8TD19 979 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 TIFAQ96CG3 184 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 UHRF2Q96PU4 802 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 WDR81Q562E7 1941 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 IGLV5-37A0A075B6J1 123 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 ZG16O60844 167 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 CLDN7O95471 211 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 TBX6O95947 436 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-220ENST00000531466 KLRK1P26718 216 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 VEGFCP49767 419 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 RBM6P78332 1123 aaKnown RBP4.71□□□□□ -1.66
PTPRK-220ENST00000531466 VWA5B1Q5TIE3 1220 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 DGKHQ86XP1 1220 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 SPEM1Q8N4L4 309 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 DBF4BQ8NFT6 615 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 TMEM163Q8TC26 289 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 PGLYRP2Q96PD5 576 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 MECRQ9BV79 373 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 Q9N2J8 555 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 SCRT2Q9NQ03 307 aa4.71□□□□□ -1.66
PTPRK-220ENST00000531466 A0A1B0GVY2 172 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 CFC1BP0CG36 223 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 CFC1P0CG37 223 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 AKT1P31749 480 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 MXI1P50539 228 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 PLEKHG6Q3KR16 790 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 C5orf22Q49AR2 442 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 IL17RCQ8NAC3 791 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 BICD1Q96G01 975 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 SLC52A1Q9NWF4 448 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 SNED1Q8TER0 1413 aa4.7□□□□□ -1.66
PTPRK-220ENST00000531466 MAGEA13PA6NCF6 341 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 ENO3P13929 434 aaPredicted RBP4.69□□□□□ -1.66
PTPRK-220ENST00000531466 DMP1Q13316 513 aaPredicted RBP4.69□□□□□ -1.66
PTPRK-220ENST00000531466 CTTNQ14247 550 aaKnown RBP4.69□□□□□ -1.66
PTPRK-220ENST00000531466 RBBP5Q15291 538 aaKnown RBP4.69□□□□□ -1.66
PTPRK-220ENST00000531466 SLC35G1Q2M3R5 365 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 ZNF569Q5MCW4 686 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 TYW3Q6IPR3 259 aaKnown RBP4.69□□□□□ -1.66
PTPRK-220ENST00000531466 RINT1Q6NUQ1 792 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 HIBCHQ6NVY1 386 aaPredicted RBP4.69□□□□□ -1.66
PTPRK-220ENST00000531466 ZNF114Q8NC26 417 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 WDR60Q8WVS4 1066 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 CD101Q93033 1021 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 EGLN1Q9GZT9 426 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 GAB2Q9UQC2 676 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 PCDHAC2Q9Y5I4 1007 aa4.69□□□□□ -1.66
PTPRK-220ENST00000531466 KDM4EB2RXH2 506 aaPredicted RBP4.68□□□□□ -1.66
PTPRK-220ENST00000531466 EYA2O00167 538 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 GLP2RO95838 553 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 HOXB9P17482 250 aaPredicted RBP4.68□□□□□ -1.66
PTPRK-220ENST00000531466 DGKAP23743 735 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 DLG1Q12959 904 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 SYTL3Q4VX76 610 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 RHBDF2Q6PJF5 856 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 C14orf80Q86SX3 495 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 ANKRD44Q8N8A2 993 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 SECTM1Q8WVN6 248 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 SORCS1Q8WY21 1168 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 JDP2Q8WYK2 163 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 TBCBQ99426 244 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 HDHD5Q9BXW7 423 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 LHPPQ9H008 270 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 TCEAL9Q9UHQ7 104 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 ADAM18Q9Y3Q7 739 aa4.68□□□□□ -1.66
PTPRK-220ENST00000531466 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 DYTNA2CJ06 578 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 AGAP5A6NIR3 686 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 APOHP02749 345 aaPredicted RBP4.67□□□□□ -1.66
PTPRK-220ENST00000531466 S100BP04271 92 aaPredicted RBP4.67□□□□□ -1.66
PTPRK-220ENST00000531466 HMGB1P09429 215 aaKnown RBP4.67□□□□□ -1.66
PTPRK-220ENST00000531466 PRPH2P23942 346 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 PRKCHP24723 683 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 TYK2P29597 1187 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 RFC1P35251 1148 aaPredicted RBP4.67□□□□□ -1.66
PTPRK-220ENST00000531466 PEX5P50542 639 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 KIAA1324Q6UXG2 1013 aaKnown RBP4.67□□□□□ -1.66
PTPRK-220ENST00000531466 RNF144BQ7Z419 303 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 KLHDC8BQ8IXV7 354 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 PGBD5Q8N414 524 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 ENDOVQ8N8Q3 282 aaKnown RBP4.67□□□□□ -1.66
PTPRK-220ENST00000531466 MMP28Q9H239 520 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 TMEM248Q9NWD8 314 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 SEL1LQ9UBV2 794 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 SLC25A13Q9UJS0 675 aa4.67□□□□□ -1.66
PTPRK-220ENST00000531466 C17orf102A2RUQ5 167 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 SLC38A8A6NNN8 435 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 NPIPB11E5RHQ5 1161 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms