RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SYNCQ9H7C4 482 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 PREBQ9HCU5 417 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 VPS51Q9UID3 782 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 HS3ST2Q9Y278 367 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 A0A1W2PQU0 124 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 KPNA3O00505 521 aaPredicted RBP18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 SMAD6O43541 496 aaKnown RBP18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 RHOCP08134 193 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 THEGLP0DJG4 465 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 RRM1P23921 792 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 PON1P27169 355 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 CHRNA3P32297 505 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 NOS2P35228 1153 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 RNASE9P60153 205 aaKnown RBP18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 INSM1Q01101 510 aaPredicted RBP18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 ILKQ13418 452 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 RTP5Q14D33 572 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 EXOC3L4Q17RC7 722 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 C5orf22Q49AR2 442 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 LINGO4Q6UY18 593 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 SLC26A9Q7LBE3 791 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 SLC47A2Q86VL8 602 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 ATP11CQ8NB49 1132 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 TMEM145Q8NBT3 493 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 CHST14Q8NCH0 376 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 OR2A12Q8NGT7 310 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 NOX5Q96PH1 765 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 NRSN2Q9GZP1 204 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 TKTL2Q9H0I9 626 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 SIX2Q9NPC8 291 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 TMPRSS4Q9NRS4 437 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 UCKL1Q9NWZ5 548 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 RAI2Q9Y5P3 530 aa18.88■□□□□ 0.61
SSSCA1-206ENST00000531405 FFAR2O15552 330 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 PRB1P04280 392 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 GLDCP23378 1020 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 ACP1P24666 158 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 CLCN1P35523 988 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 KRT9P35527 623 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 PTK2Q05397 1052 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 BECN1Q14457 450 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 LRRC69Q6ZNQ3 347 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 IRF2BP1Q8IU81 584 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 ZNF683Q8IZ20 524 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 GRIN3AQ8TCU5 1115 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 NPY6RQ99463 290 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 CALN1Q9BXU9 219 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 TNKS2Q9H2K2 1166 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 WDCPQ9H6R7 721 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 ARHGEF38Q9NXL2 777 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 MPP6Q9NZW5 540 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 RWDD2AQ9UIY3 292 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 CLCA2Q9UQC9 943 aa18.87■□□□□ 0.61
SSSCA1-206ENST00000531405 COL27A1Q8IZC6 1860 aaPredicted RBP18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 A0A0D9SEW6 157 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 BRINP1O60477 761 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 DGKAP23743 735 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 CXCR3P49682 368 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 SULT1E1P49888 294 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 CLDN2P57739 230 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 KRT83P78385 493 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 KCNMA1Q12791 1236 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 MTA1Q13330 715 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 ZNF211Q13398 564 aaPredicted RBP18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 ZNF284Q2VY69 593 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 KDM7AQ6ZMT4 941 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 TFAP2DQ7Z6R9 452 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 ZNF397Q8NF99 534 aaPredicted RBP18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 OR13H1Q8NG92 308 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 RFFLQ8WZ73 363 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 C2orf49Q9BVC5 232 aaPredicted RBP18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 PRORYQ9H606 182 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 DNAJC12Q9UKB3 198 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 ZFR2Q9UPR6 939 aaKnown RBP18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 FARP1Q9Y4F1 1045 aaPredicted RBP18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 KIF26BQ2KJY2 2108 aa18.86■□□□□ 0.61
SSSCA1-206ENST00000531405 RP1P56715 2156 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 FOXN3O00409 490 aaPredicted RBP18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 ENDOD1O94919 500 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 MYF5P13349 255 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 DAB2P98082 770 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 CAMK4Q16566 473 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 ARSIQ5FYB1 569 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 BRMS1LQ5PSV4 323 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 SEL1L3Q68CR1 1132 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 TMC6Q7Z403 805 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 HORMAD1Q86X24 394 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 SLC22A18ASQ8N1D0 253 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 DCBLD1Q8N8Z6 715 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 TMIEQ8NEW7 156 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 OR7D4Q8NG98 312 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 CCDC114Q96M63 670 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 UBL7Q96S82 380 aaPredicted RBP18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 TBCBQ99426 244 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 DYRK4Q9NR20 520 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 KLHL11Q9NVR0 708 aa18.85■□□□□ 0.61
SSSCA1-206ENST00000531405 GTPBP10A4D1E9 387 aaKnown RBP18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 RRP8O43159 456 aaKnown RBP18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 PCDH8O95206 1070 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms