RNA–Protein interactions for RNA: ENST00000531018.5

SYVN1-213, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-213ENST00000531018 RETSATQ6NUM9 610 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 RWDD4Q6NW29 188 aaKnown RBP9.41□□□□□ -0.9
SYVN1-213ENST00000531018 RFX8Q6ZV50 586 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 USP30Q70CQ3 517 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 POLNQ7Z5Q5 900 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 SLC41A1Q8IVJ1 513 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 CCDC170Q8IYT3 715 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 PGBD3Q8N328 593 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
SYVN1-213ENST00000531018 CADM4Q8NFZ8 388 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 OR2A12Q8NGT7 310 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 ZNF564Q8TBZ8 553 aaPredicted RBP9.41□□□□□ -0.9
SYVN1-213ENST00000531018 CTNNBL1Q8WYA6 563 aaPredicted RBP9.41□□□□□ -0.9
SYVN1-213ENST00000531018 DNASE2BQ8WZ79 361 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 ISG20Q96AZ6 181 aaKnown RBP9.41□□□□□ -0.9
SYVN1-213ENST00000531018 ERLEC1Q96DZ1 483 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 BTBD6Q96KE9 485 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 SPACA7Q96KW9 195 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 CEP44Q9C0F1 390 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 PCED1AQ9H1Q7 454 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 PABPC3Q9H361 631 aaKnown RBP9.41□□□□□ -0.9
SYVN1-213ENST00000531018 CATSPERBQ9H7T0 1116 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 OSGEPQ9NPF4 335 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 GPATCH2LQ9NWQ4 482 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 CWC15Q9P013 229 aaKnown RBP9.41□□□□□ -0.9
SYVN1-213ENST00000531018 PCSK1NQ9UHG2 260 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 DNAI1Q9UI46 699 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 LCMT1Q9UIC8 334 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 SLC25A13Q9UJS0 675 aa9.41□□□□□ -0.9
SYVN1-213ENST00000531018 CDV3Q9UKY7 258 aaKnown RBP9.41□□□□□ -0.9
SYVN1-213ENST00000531018 ASCC3Q8N3C0 2202 aaKnown RBP9.41□□□□□ -0.9
SYVN1-213ENST00000531018 SPEGQ15772 3267 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 CREB3O43889 395 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 RAMP2O60895 175 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 GOT1P17174 413 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 ERCC2P18074 760 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 KCNA4P22459 653 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 HOXD12P35452 270 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 DRD3P35462 400 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 ARHGAP25P42331 645 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 NUMBP49757 651 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 NDST2P52849 883 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 LMNB2Q03252 620 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 SERINC3Q13530 473 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 POLD3Q15054 466 aaPredicted RBP9.4□□□□□ -0.9
SYVN1-213ENST00000531018 CST6Q15828 149 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 PARP15Q460N3 678 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 INO80DQ53TQ3 878 aaPredicted RBP9.4□□□□□ -0.9
SYVN1-213ENST00000531018 KCNT1Q5JUK3 1230 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 KIAA1324Q6UXG2 1013 aaKnown RBP9.4□□□□□ -0.9
SYVN1-213ENST00000531018 LINGO4Q6UY18 593 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 LPCAT2Q7L5N7 544 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.4□□□□□ -0.9
SYVN1-213ENST00000531018 CPNE8Q86YQ8 564 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 TMEM139Q8IV31 216 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 ARHGAP12Q8IWW6 846 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 STK40Q8N2I9 435 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 AADATQ8N5Z0 425 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 C1orf216Q8TAB5 229 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 SLC35G2Q8TBE7 412 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 TOE1Q96GM8 510 aaKnown RBP9.4□□□□□ -0.9
SYVN1-213ENST00000531018 ARRDC1-AS1Q9H2J1 176 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 DEF6Q9H4E7 631 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 DHX35Q9H5Z1 703 aaKnown RBP9.4□□□□□ -0.9
SYVN1-213ENST00000531018 PDFQ9HBH1 243 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 ATP13A1Q9HD20 1204 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 DONSONQ9NYP3 566 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 CTTNBP2NLQ9P2B4 639 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 RCOR3Q9P2K3 495 aaPredicted RBP9.4□□□□□ -0.9
SYVN1-213ENST00000531018 IMPACTQ9P2X3 320 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 PILRBQ9UKJ0 227 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 SARDHQ9UL12 918 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 FZD4Q9ULV1 537 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 CYP8B1Q9UNU6 501 aa9.4□□□□□ -0.9
SYVN1-213ENST00000531018 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.4□□□□□ -0.9
SYVN1-213ENST00000531018 SHROOM3Q8TF72 1996 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 ANKRD36A6QL64 1941 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 ADAMTS9Q9P2N4 1935 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 ZSCAN5CA6NGD5 496 aaPredicted RBP9.39□□□□□ -0.91
SYVN1-213ENST00000531018 PCNX2A6NKB5 2137 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 RASA4BC9J798 803 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 RNF103O00237 685 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 CBX4O00257 560 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 EEF2KO00418 725 aaKnown RBP9.39□□□□□ -0.91
SYVN1-213ENST00000531018 RASA4O43374 803 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 FOXD2O60548 495 aaPredicted RBP9.39□□□□□ -0.91
SYVN1-213ENST00000531018 CTSLP07711 333 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 C5AR1P21730 350 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 SLC8A1P32418 973 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 ACSL1P33121 698 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 MPLP40238 635 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 TAS2R40P59535 323 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 TPI1P60174 286 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 RPL6Q02878 288 aaKnown RBP9.39□□□□□ -0.91
SYVN1-213ENST00000531018 ZNF33AQ06730 810 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 C22orf39Q6P5X5 142 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 Q6ZVU0 165 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 TMTC1Q8IUR5 882 aa9.39□□□□□ -0.91
SYVN1-213ENST00000531018 SYT12Q8IV01 421 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms