RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 GPR161Q8N6U8 529 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 HSPH1Q92598 858 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 TOE1Q96GM8 510 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 ARRDC1-AS1Q9H2J1 176 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 PABPC3Q9H361 631 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 CWC15Q9P013 229 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 IMPACTQ9P2X3 320 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 HPCAL4Q9UM19 191 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 SCML1Q9UN30 329 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 EP300Q09472 2414 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 RALGAPA1Q6GYQ0 2036 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 NUP205Q92621 2012 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 BCLAF3A2AJT9 711 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 RASA4BC9J798 803 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 MCF2LO15068 1137 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 DAPK3O43293 454 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 RASA4O43374 803 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 ZNF821O75541 412 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 ERCC2P18074 760 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 SLC8A1P32418 973 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 MAN1A1P33908 653 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 ARHGAP25P42331 645 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 PTGER3P43115 390 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 SSR1P43307 286 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 DHPSP49366 369 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 NDST2P52849 883 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 CREB5Q02930 508 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 DPYSQ14117 519 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 MESDQ14696 234 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 PARP15Q460N3 678 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 TTC31Q49AM3 519 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 USP30Q70CQ3 517 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 POLNQ7Z5Q5 900 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 CPNE8Q86YQ8 564 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 DEFB119Q8N690 84 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 OR2A12Q8NGT7 310 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 RFFLQ8WZ73 363 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 OR8D1Q8WZ84 308 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 ZNF419Q96HQ0 510 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 CEP44Q9C0F1 390 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 KLC2Q9H0B6 622 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 LRRC19Q9H756 370 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 PARD6AQ9NPB6 346 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 PPM1HQ9ULR3 514 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 ACTL7AQ9Y615 435 aa12.94□□□□□ -0.34
CCDC90B-216ENST00000529856 NYNRINQ9P2P1 1898 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 ZSCAN5CA6NGD5 496 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 H3BRJ5 948 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 ALOX15BO15296 676 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 MID1O15344 667 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 ADH1BP00325 375 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 IL1BP01584 269 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 C5AR1P21730 350 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 MPLP40238 635 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 ARL4AP40617 200 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 GEMIN4P57678 1058 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 ZNF33AQ06730 810 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 SFSWAPQ12872 951 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 SERINC3Q13530 473 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 SPA17Q15506 151 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 CSRP2Q16527 193 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 ATP13A4Q4VNC1 1196 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 AFMIDQ63HM1 303 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 C22orf39Q6P5X5 142 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 CYP2U1Q7Z449 544 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 DSG4Q86SJ6 1040 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 FAM124AQ86V42 546 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 SLC41A1Q8IVJ1 513 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 CADM4Q8NFZ8 388 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 FAM71BQ8TC56 605 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 FOXJ1Q92949 421 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 ISG20Q96AZ6 181 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 HMCESQ96FZ2 354 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 CCDC114Q96M63 670 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 GPR174Q9BXC1 333 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 SLC39A8Q9C0K1 460 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 PCDH18Q9HCL0 1135 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 SEMA4GQ9NTN9 838 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 FBXL12Q9NXK8 326 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 NCKAP1Q9Y2A7 1128 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 FARP1Q9Y4F1 1045 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 PCDHA13Q9Y5I0 950 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 ZNF292O60281 2723 aa12.93□□□□□ -0.34
CCDC90B-216ENST00000529856 TNRC6BQ9UPQ9 1833 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 A0A1W2PP55 124 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 SOWAHDA6NJG2 315 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 TMEM110-MUSTN1A8MSY1 372 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 BUB1O43683 1085 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 BNIP3LO60238 219 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 NDUFA10O95299 355 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 ZNF806P0C7X5 589 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 AMPD1P23109 780 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 IL4RP24394 825 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 CHRNA3P32297 505 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 ACSL1P33121 698 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 PSMD8P48556 350 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms