RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PQLC3Q8N755 202 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ZNF513Q8N8E2 541 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 CEP112Q8N8E3 955 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ATP11CQ8NB49 1132 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ATL2Q8NHH9 583 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 RIN3Q8TB24 985 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ZNF592Q92610 1267 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 WBP2Q969T9 261 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 PPP1R16AQ96I34 528 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 GDAP1L1Q96MZ0 367 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 TUBGCP5Q96RT8 1024 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 PRRX2Q99811 253 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 HEMGNQ9BXL5 484 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 POLR1EQ9GZS1 481 aaKnown RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 RAB6CQ9H0N0 254 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 LTB4R2Q9NPC1 389 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 TMPRSS4Q9NRS4 437 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 DTLQ9NZJ0 730 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 THAP10Q9P2Z0 257 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ZNF212Q9UDV6 495 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 MUTYHQ9UIF7 546 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 CDC23Q9UJX2 597 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 DNPEPQ9ULA0 475 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 TPX2Q9ULW0 747 aaKnown RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ERVW-1Q9UQF0 538 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ZNF148Q9UQR1 794 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 AAR2Q9Y312 384 aaKnown RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 COL4A2P08572 1712 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 A0A0U1RQJ8 604 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 BCLAF3A2AJT9 711 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 FAM170BA6NMN3 283 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 ERI2A8K979 691 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 TNFRSF10AO00220 468 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 NARSO43776 548 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 ATP9BO43861 1147 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 MFSD11O43934 449 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 OPHN1O60890 802 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 ANXA9O76027 345 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 URI1O94763 535 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 POP4O95707 220 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 GSRP00390 522 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 PRNPP04156 253 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 RBP3P10745 1247 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CCNB1P14635 433 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CD70P32970 193 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 GGCXP38435 758 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 MMP13P45452 471 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 PAPOLAP51003 745 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CCR3P51677 355 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 DGKEP52429 567 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 NRLP54845 237 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 AP1S1P61966 158 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 POLR2LP62875 67 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 IFI35P80217 286 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 SARNPP82979 210 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 OTUD4Q01804 1114 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 ZNF211Q13398 564 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CCINQ13939 588 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 DHX34Q14147 1143 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 ELAVL3Q14576 367 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 LBRQ14739 615 aaKnown RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 FUT11Q495W5 492 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 TTC31Q49AM3 519 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CFAP58Q5T655 872 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 SYT13Q7L8C5 426 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 BMP8AQ7Z5Y6 402 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 PCGF5Q86SE9 256 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 ADIPOR2Q86V24 386 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 C11orf74Q86VG3 221 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CIR1Q86X95 450 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CCDC105Q8IYK2 499 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 SPEM1Q8N4L4 309 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 SH2D3CQ8N5H7 860 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CAMKK1Q8N5S9 505 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 PAF1Q8N7H5 531 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 C12orf50Q8NA57 414 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 BBOF1Q8ND07 529 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 PJA1Q8NG27 643 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 ACTL9Q8TC94 416 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 HCAR2Q8TDS4 363 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 HTR3CQ8WXA8 447 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 ATRIPQ8WXE1 791 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 NKD2Q969F2 451 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 HMCESQ96FZ2 354 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 OLFM3Q96PB7 478 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 QKIQ96PU8 341 aaKnown RBP eCLIP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 PSKH2Q96QS6 385 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 WDR24Q96S15 920 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 C1QTNF1Q9BXJ1 281 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 SLC39A8Q9C0K1 460 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 TBC1D17Q9HA65 648 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 DYRK4Q9NR20 520 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 VPS45Q9NRW7 570 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 VPS51Q9UID3 782 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CA14Q9ULX7 337 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 NEU3Q9UQ49 428 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 ARIH1Q9Y4X5 557 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-211ENST00000528787 OR51B4Q9Y5P0 310 aa8.08□□□□□ -1.12
SSBP3-211ENST00000528787 CTAGE15A4D2H0 777 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 SGK1O00141 431 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms