RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 RAD54BQ9Y620 910 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 A0A087X1B8 175 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 A0A0A0MRY4 1105 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 C2CD2LO14523 706 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 GUCA1CO95843 209 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 ALDH2P05091 517 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 SLURP2P0DP57 97 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 GRM5P41594 1212 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 MARCKSL1P49006 195 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 AKR1D1P51857 326 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 PLOD1Q02809 727 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-218ENST00000528232 PLD1Q13393 1074 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 KCTD21Q4G0X4 260 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 LACTB2Q53H82 288 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-218ENST00000528232 IYDQ6PHW0 289 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 LAYNQ6UX15 382 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 BBS12Q6ZW61 710 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 NET1Q7Z628 596 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-218ENST00000528232 GALNT6Q8NCL4 622 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 MRPS31Q92665 395 aaKnown RBP7.33□□□□□ -1.24
CTNND1-218ENST00000528232 COPS5Q92905 334 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 CNDP1Q96KN2 507 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 SPATA13Q96N96 652 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 MYLK2Q9H1R3 596 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 ABCC13Q9NSE7 274 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 DDX18Q9NVP1 670 aaKnown RBP7.33□□□□□ -1.24
CTNND1-218ENST00000528232 CRNNQ9UBG3 495 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-218ENST00000528232 TIMM13Q9Y5L4 95 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-218ENST00000528232 CLUHO75153 1309 aa7.33□□□□□ -1.24
CTNND1-218ENST00000528232 IGLV3-22A0A075B6J6 115 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 DCDC2CA8MYV0 355 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 MTRF1O75570 445 aaKnown RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 S100A6P06703 90 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 YBX3P16989 372 aaKnown RBP eCLIP7.32□□□□□ -1.249e-12■□□□□ 9.1
CTNND1-218ENST00000528232 FECHP22830 423 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 TUBP50607 506 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 LPIN1Q14693 890 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 PKN3Q6P5Z2 889 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 IFNEQ86WN2 208 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 CLVS1Q8IUQ0 354 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 VPS37AQ8NEZ2 397 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 OR5B17Q8NGF7 314 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 LHX5Q9H2C1 402 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 MORF4L1Q9UBU8 362 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 ADAM28Q9UKQ2 775 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 TRIM43BA6NCK2 446 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 TRIM64CA6NLI5 447 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 IRF6O14896 467 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 TRIM13O60858 407 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 URODP06132 367 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 RHOAP61586 193 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 HIST2H2ACQ16777 129 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 HIST2H2AA3Q6FI13 130 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 ITIH5Q86UX2 942 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 SENP8Q96LD8 212 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 RNF157Q96PX1 679 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 SPATA16Q9BXB7 569 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 MRPL9Q9BYD2 267 aaKnown RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 CLPBQ9H078 707 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 HSD3B7Q9H2F3 369 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 RMND5AQ9H871 391 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 XPNPEP3Q9NQH7 507 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 UBP1Q9NZI7 540 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 PCDHGA3Q9Y5H0 932 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 TCHHQ07283 1943 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 E9PBE3 544 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 FCHO1O14526 889 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 RAMP2O60895 175 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 KATNA1O75449 491 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 PSMG1O95456 288 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 ZSCAN5DPP0CG00 497 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 ETS1P14921 441 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 NPR3P17342 541 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 HOXB8P17481 243 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 PPP3CCP48454 512 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 POU6F1Q14863 301 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 PRMT9Q6P2P2 845 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 C11orf74Q86VG3 221 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 TTC30AQ86WT1 665 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 ANKRD52Q8NB46 1076 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 PIK3C3Q8NEB9 887 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 KLRG1Q96E93 195 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 KREMEN1Q96MU8 473 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 ULBP1Q9BZM6 244 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 NMRAL1Q9HBL8 299 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 TCF7L2Q9NQB0 619 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 ENTPD7Q9NQZ7 604 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 USE1Q9NZ43 259 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 CDH9Q9ULB4 789 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 SERPINF2P08697 491 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 YWHAQP27348 245 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 RPA3P35244 121 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 RPL22P35268 128 aaKnown RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 MRPS6P82932 125 aaKnown RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 SHROOM1Q2M3G4 852 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 RNF43Q68DV7 783 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 FAM117BQ6P1L5 589 aa7.32□□□□□ -1.24
CTNND1-218ENST00000528232 SHQ1Q6PI26 577 aaKnown RBP7.32□□□□□ -1.24
CTNND1-218ENST00000528232 NPNTQ6UXI9 565 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms