RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ACVRL1P37023 503 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 RECQLP46063 649 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-213ENST00000527897 VASPP50552 380 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-213ENST00000527897 AFF3P51826 1226 aaKnown RBP15.89■□□□□ 0.13
CAPN1-213ENST00000527897 ADPRHP54922 357 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 ZNF252P-AS1Q0IIN9 211 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 TEAD4Q15561 434 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 ARTNQ5T4W7 220 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 RETSATQ6NUM9 610 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 PPP1R2P3Q6NXS1 205 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 C22orf39Q6P5X5 142 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 TMC6Q7Z403 805 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 OR2T34Q8NGX1 318 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 CNPY3Q9BT09 278 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 SYT11Q9BT88 431 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 ZDHHC5Q9C0B5 715 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 GAREM1Q9H706 876 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 NDFIP2Q9NV92 336 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 PARVAQ9NVD7 372 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 AIPL1Q9NZN9 384 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 MYO1AQ9UBC5 1043 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 ZNF212Q9UDV6 495 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 ADAMTS1Q9UHI8 967 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 ACTL7AQ9Y615 435 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 KPNA3O00505 521 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-213ENST00000527897 MCF2LO15068 1137 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 RTN2O75298 545 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 FTLP02792 175 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-213ENST00000527897 IGHV4-34P06331 123 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 RHOQP17081 205 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 PSMA2P25787 234 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 CHRNA3P32297 505 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 OGDHQ02218 1023 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 NRG1Q02297 640 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-213ENST00000527897 SEMA3BQ13214 749 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 PPP1R15BQ5SWA1 713 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 MANEALQ5VSG8 457 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 ZNF783Q6ZMS7 281 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 LEKR1Q6ZMV7 388 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 CHST14Q8NCH0 376 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 C1orf216Q8TAB5 229 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 GRIN3AQ8TCU5 1115 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 NTAN1Q96AB6 310 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 ZNF653Q96CK0 615 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 SLC6A18Q96N87 628 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.88■□□□□ 0.13
CAPN1-213ENST00000527897 TTYH3Q9C0H2 523 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 IL21RQ9HBE5 538 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 AASDHPPTQ9NRN7 309 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 IFNKQ9P0W0 207 aa15.88■□□□□ 0.13
CAPN1-213ENST00000527897 CNOT8Q9UFF9 292 aaKnown RBP15.88■□□□□ 0.13
CAPN1-213ENST00000527897 TMEM131Q92545 1883 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 DDX3XO00571 662 aaKnown RBP eCLIP15.87■□□□□ 0.13
CAPN1-213ENST00000527897 ALOX15BO15296 676 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 CER1O95813 267 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 CEACAM1P13688 526 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 CSRP1P21291 193 aaKnown RBP15.87■□□□□ 0.13
CAPN1-213ENST00000527897 EPHB2P29323 1055 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 MAT2AP31153 395 aaKnown RBP15.87■□□□□ 0.13
CAPN1-213ENST00000527897 PRKCIP41743 596 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 MAPKAPK2P49137 400 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 CLCN6P51797 869 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 PPP2CBP62714 309 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 PPP2CAP67775 309 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 BNC1Q01954 994 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 CNTN1Q12860 1018 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 MAMLD1Q13495 774 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 SKOR2Q2VWA4 1001 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-213ENST00000527897 HLA-BQ31612 363 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 NLRP14Q86W24 1093 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 RYBPQ8N488 228 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-213ENST00000527897 OR2A12Q8NGT7 310 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 VCPIP1Q96JH7 1222 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 CAMK1GQ96NX5 476 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 EPAS1Q99814 870 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 EDEM3Q9BZQ6 932 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 DYRK4Q9NR20 520 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 DNAAF2Q9NVR5 837 aaKnown RBP15.87■□□□□ 0.13
CAPN1-213ENST00000527897 TMEM248Q9NWD8 314 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 GPATCH2LQ9NWQ4 482 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 PCSK1NQ9UHG2 260 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 PPM1HQ9ULR3 514 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 FZD10Q9ULW2 581 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 HPCAL4Q9UM19 191 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 ANKRD6Q9Y2G4 727 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 FCF1Q9Y324 198 aaKnown RBP15.87■□□□□ 0.13
CAPN1-213ENST00000527897 SNX11Q9Y5W9 270 aa15.87■□□□□ 0.13
CAPN1-213ENST00000527897 SPAARA0A1B0GVQ0 90 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 A0A1W2PPC4 97 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 KCNK3O14649 394 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 SH3BP5O60239 455 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 RAMP2O60895 175 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 CTSLP07711 333 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 CD59P13987 128 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 ETFBP38117 255 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 SERPINH1P50454 418 aaKnown RBP15.86■□□□□ 0.13
CAPN1-213ENST00000527897 C21orf59P57076 290 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 ARF5P84085 180 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 SCAPQ12770 1279 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 FOXC1Q12948 553 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms