RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TMEM51Q9NW97 253 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 TAS2R14Q9NYV8 317 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 ADAM22Q9P0K1 906 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 ARHGAP20Q9P2F6 1191 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 PPARGC1AQ9UBK2 798 aaKnown RBP10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 KLK13Q9UKR3 277 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 PCOLCE2Q9UKZ9 415 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 BTBD3Q9Y2F9 522 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 PAXBP1Q9Y5B6 917 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 TMEM131Q92545 1883 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3DA0A087WVF3 549 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3IA0A087WXS9 549 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3EA0A087X179 549 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3KA0A087X1G2 549 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 ILVBLA1L0T0 632 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3FA6NER0 549 aaPredicted RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 SIGLEC16A6NMB1 481 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3LB9A6J9 549 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 VILLO15195 856 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 ALOX15BO15296 676 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 LATO43561 262 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 PLRG1O43660 514 aaKnown RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 KRT37O76014 449 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 CER1O95813 267 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3HP0C7X1 549 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 KRT3P12035 628 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 SDC4P31431 198 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 CHRNA3P32297 505 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 ACVRL1P37023 503 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 NSFP46459 744 aaKnown RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 RACK1P63244 317 aaKnown RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 KRT83P78385 493 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 ARF5P84085 180 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 NRG1Q02297 640 aaPredicted RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 GNA12Q03113 381 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 SFSWAPQ12872 951 aaKnown RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 SHBQ15464 509 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TEAD4Q15561 434 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 PPP1R15BQ5SWA1 713 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 C6orf118Q5T5N4 469 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 E4F1Q66K89 784 aaPredicted RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3GQ6DHY5 549 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3CQ6IPX1 549 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 STRADAQ7RTN6 431 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 NLRP14Q86W24 1093 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 DNAAF5Q86Y56 855 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 DRC7Q8IY82 874 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TBC1D3Q8IZP1 549 aaPredicted RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 PYROXD2Q8N2H3 581 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 CHCHD4Q8N4Q1 142 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 PNPLA1Q8N8W4 532 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 ATP11CQ8NB49 1132 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 SETD7Q8WTS6 366 aaKnown RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 FAM172AQ8WUF8 416 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 VOPP1Q96AW1 172 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 ARRDC3Q96B67 414 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 BPIFA3Q9BQP9 254 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 SPON2Q9BUD6 331 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 C2orf49Q9BVC5 232 aaPredicted RBP10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 ZYG11BQ9C0D3 744 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 OSBPL2Q9H1P3 480 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 TNKS2Q9H2K2 1166 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 OR12D3Q9UGF7 316 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 PCDHGB2Q9Y5G2 931 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 FRYQ5TBA9 3013 aa10.68□□□□□ -0.7
PRPF40B-204ENST00000527253 CHD5Q8TDI0 1954 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 CBX4O00257 560 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 SLC7A4O43246 635 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 CCP110O43303 1012 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 LRIG2O94898 1065 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 CALB1P05937 261 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 PLEKP08567 350 aaPredicted RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 FTH1P19P0C7X4 201 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 GPD1P21695 349 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 MAT2AP31153 395 aaKnown RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 RPL7AP62424 266 aaKnown RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 IL9RQ01113 521 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 OGDHQ02218 1023 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 C1QBPQ07021 282 aaKnown RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 HNRNPDQ14103 355 aaKnown RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 IQCB1Q15051 598 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 ST3GAL2Q16842 350 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 ACBD5Q5T8D3 534 aaPredicted RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 PIP5KL1Q5T9C9 394 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 FAM46CQ5VWP2 391 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 ACAD10Q6JQN1 1059 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 CAVIN1Q6NZI2 390 aaKnown RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 C22orf39Q6P5X5 142 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 ZNF783Q6ZMS7 281 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 DPY19L3Q6ZPD9 716 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 RAB44Q7Z6P3 723 aaPredicted RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 DSG4Q86SJ6 1040 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 MCOLN2Q8IZK6 566 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 C3orf20Q8ND61 904 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 TMIEQ8NEW7 156 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 GATA6Q92908 595 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 NAP1L5Q96NT1 182 aaPredicted RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 SELENOOQ9BVL4 669 aa10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 ACE2Q9BYF1 805 aaPredicted RBP10.67□□□□□ -0.7
PRPF40B-204ENST00000527253 NOL6Q9H6R4 1146 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms