RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 IGHV1OR15-9A0A0B4J2B8 117 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 LRRD1A4D1F6 860 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ANTXRLA6NF34 631 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 LRRC72A6NJI9 287 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 RASA4BC9J798 803 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 KPNA3O00505 521 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 RASA4O43374 803 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 PSTPIP1O43586 416 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 KDELR3O43731 214 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 LRP3O75074 770 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 RNASEH2AO75792 299 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 IGSF6O95976 241 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 KRT1P04264 644 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 PTMAP06454 111 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 RETP07949 1114 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 SRCP12931 536 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 TNNT1P13805 278 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 GNSP15586 552 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZFXP17010 805 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ERCC2P18074 760 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 C5AR1P21730 350 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 IL1R2P27930 398 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLC8A1P32418 973 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ACVRL1P37023 503 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 CETN2P41208 172 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 TPMTP51580 245 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 VAV2P52735 878 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 COPAP53621 1224 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 HADHBP55084 474 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 RHOAP61586 193 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 RPS14P62263 151 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 SNRPD1P62314 119 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 CREB5Q02930 508 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 SERINC3Q13530 473 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 RFTN1Q14699 578 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 TCEAL1Q15170 157 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 CA9Q16790 459 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 MAP7D1Q3KQU3 841 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 PLK5Q496M5 336 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 WDR45BQ5MNZ6 344 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 C9orf64Q5T6V5 341 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 TMCO4Q5TGY1 634 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 LRRC38Q5VT99 294 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 DAB2IPQ5VWQ8 1189 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 LYSMD4Q5XG99 296 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 PMS2CLQ68D20 193 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 C11orf63Q6NUN7 778 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 USP30Q70CQ3 517 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 DAAM2Q86T65 1068 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 FAM124AQ86V42 546 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 MMAAQ8IVH4 418 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 RGL4Q8IZJ4 473 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 SYCE1Q8N0S2 351 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 STK40Q8N2I9 435 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ATPAF2Q8N5M1 289 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARFGAP1Q8N6T3 406 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 C12orf50Q8NA57 414 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 OR52K2Q8NGK3 314 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 GRIN3AQ8TCU5 1115 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 RLN3Q8WXF3 142 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 SNX19Q92543 992 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ISG20Q96AZ6 181 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ALG14Q96F25 216 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 HMCESQ96FZ2 354 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 TOE1Q96GM8 510 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 CELF6Q96J87 481 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZC3H10Q96K80 434 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 GDAP1L1Q96MZ0 367 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 CSPG4P5Q96PW8 444 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 PSMB7Q99436 277 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF670Q9BS34 389 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 CINPQ9BW66 212 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ACE2Q9BYF1 805 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 TSGA10Q9BZW7 698 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 MKRN2Q9H000 416 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 BTBD1Q9H0C5 482 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 PCED1AQ9H1Q7 454 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLC6A17Q9H1V8 727 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 PABPC3Q9H361 631 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 SGK2Q9HBY8 427 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 PCDH18Q9HCL0 1135 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ITM2CQ9NQX7 267 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 FBXL12Q9NXK8 326 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 CWC15Q9P013 229 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 USP36Q9P275 1121 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 UBA2Q9UBT2 640 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF212Q9UDV6 495 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 SUSD2Q9UGT4 822 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 IL36AQ9UHA7 158 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 FZD4Q9ULV1 537 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 TPX2Q9ULW0 747 aaKnown RBP5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 NEU3Q9UQ49 428 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF318Q5VUA4 2279 aa5.51□□□□□ -1.53
HMGB1P40-201ENST00000525121 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 A0A1W2PP55 124 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 BTNL10A8MVZ5 291 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF487B1APH4 448 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 K7ERQ8 282 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 KRIT1O00522 736 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 APOL1O14791 398 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms