RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 LEKR1Q6ZMV7 388 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 NLRP14Q86W24 1093 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 MINDY1Q8N5J2 469 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 CHST14Q8NCH0 376 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 RNF214Q8ND24 703 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 OR14C36Q8NHC7 312 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 PIP4K2CQ8TBX8 421 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 PCED1AQ9H1Q7 454 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 TSPY26PQ9H489 355 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 TMEM248Q9NWD8 314 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 PCSK1NQ9UHG2 260 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 ADAMTS1Q9UHI8 967 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 CAPN11Q9UMQ6 739 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 A0A1B0GVT2 93 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 TMEM191CA6NGB0 347 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 LRRC72A6NJI9 287 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 RNF103O00237 685 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 GIPC1O14908 333 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 KCNK5O95279 499 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 GYPCP04921 128 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 IGHV4-34P06331 123 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 CTSLP07711 333 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 EPHB2P29323 1055 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 CASP14P31944 242 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 L1CAMP32004 1257 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 DRD3P35462 400 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 CSNK1EP49674 416 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 DNA2P51530 1060 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 ARF5P84085 180 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 BNC1Q01954 994 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 ZNF252P-AS1Q0IIN9 211 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 SCAPQ12770 1279 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 GRIK2Q13002 908 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 NFKBIBQ15653 356 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 PSAPL1Q6NUJ1 521 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 LAYNQ6UX15 382 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 DSG4Q86SJ6 1040 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 ARFGAP1Q8N6T3 406 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 OR2A12Q8NGT7 310 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 C1orf216Q8TAB5 229 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 ARHGEF2Q92974 986 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 ACE2Q9BYF1 805 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 ISCUQ9H1K1 167 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 EBF2Q9HAK2 575 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 PPM1HQ9ULR3 514 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 FZD4Q9ULV1 537 aa13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 FCF1Q9Y324 198 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 LUC7L2Q9Y383 392 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3DA0A087WVF3 549 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3IA0A087WXS9 549 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3EA0A087X179 549 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3KA0A087X1G2 549 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3FA6NER0 549 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3LB9A6J9 549 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 C1QTNF3-AMACRE9PGA6 284 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 OPHN1O60890 802 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 CD160O95971 181 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 SERPING1P05155 500 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3HP0C7X1 549 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 DESP17661 470 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 CD27P26842 260 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 CHRNA3P32297 505 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 MAPKAPK2P49137 400 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 SERPINH1P50454 418 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 NOVA1P51513 510 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 ADPRHP54922 357 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 CNTN1Q12860 1018 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 POLD3Q15054 466 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 CA9Q16790 459 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 N4BP2L1Q5TBK1 243 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 FAM46CQ5VWP2 391 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3GQ6DHY5 549 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3CQ6IPX1 549 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 RETSATQ6NUM9 610 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 C22orf39Q6P5X5 142 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 ZNF354CQ86Y25 554 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TBC1D3Q8IZP1 549 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 DEFB124Q8NES8 71 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 OR2T34Q8NGX1 318 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 SYN2Q92777 582 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 ARRDC3Q96B67 414 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 PEBP4Q96S96 227 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 ORAI3Q9BRQ5 295 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 DHX35Q9H5Z1 703 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 IL21RQ9HBE5 538 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 TM9SF3Q9HD45 589 aa13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-205ENST00000525079 LAMA1P25391 3075 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 PLXNA2O75051 1894 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 A0A087X0T9 212 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 KPNA3O00505 521 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 KCNK3O14649 394 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 ALOX15BO15296 676 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 RAMP2O60895 175 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 ZNF821O75541 412 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 RNF8O76064 485 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 FAM228BP0C875 321 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 RECQLP46063 649 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 CLCN6P51797 869 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms