RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 CCDC114Q96M63 670 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 NOX5Q96PH1 765 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 ZSWIM1Q9BR11 485 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 TRIM62Q9BVG3 475 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 CAAP1Q9H8G2 361 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 NCKIPSDQ9NZQ3 722 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 IL17BQ9UHF5 180 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 IPO11Q9UI26 975 aaKnown RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 HS3ST3A1Q9Y663 406 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 SYNJ2BP-COX16A0A087WUM0 186 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 LY6G6EA0A0G2JKS1 128 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 A6NNZ2 444 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 H3BM21 787 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 SLC16A3O15427 465 aaKnown RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 TRUB2O95900 331 aaKnown RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 CALCAP01258 141 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 CHRNA3P32297 505 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 NDUFA8P51970 172 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 YWHAZP63104 245 aaKnown RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 NFATC3Q12968 1075 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 CDKN3Q16667 212 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 ARL13BQ3SXY8 428 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 ZCCHC8Q6NZY4 707 aaKnown RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 RBM44Q6ZP01 1051 aaKnown RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 BEND5Q7L4P6 421 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 EFL1Q7Z2Z2 1120 aaKnown RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 ABI3BPQ7Z7G0 1075 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 SMYD4Q8IYR2 804 aaPredicted RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 SLC22A18ASQ8N1D0 253 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 PPM1KQ8N3J5 372 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 SH2D3CQ8N5H7 860 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 ATP11CQ8NB49 1132 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 WDR36Q8NI36 951 aaKnown RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 ARRDC3Q96B67 414 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 RPRD1AQ96P16 312 aaPredicted RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 NT5C1BQ96P26 610 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 TSG101Q99816 390 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 FEM1AQ9BSK4 669 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 TRIM4Q9C037 500 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 POPDC2Q9HBU9 364 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 COX16Q9P0S2 106 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 ARMCX3Q9UH62 379 aaPredicted RBP8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 VPS28Q9UK41 221 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 HPSEQ9Y251 543 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 PCDHGA8Q9Y5G5 932 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 ENTPD2Q9Y5L3 495 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 U3KQA8 63 aa8.14□□□□□ -1.11
NSMCE2-213ENST00000523824 A0A1W2PNU3 283 aaPredicted RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 AQP9O43315 295 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 LZTS3O60299 673 aaPredicted RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 TNFSF15O95150 251 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 GJB6O95452 261 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 PAK4O96013 591 aaPredicted RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 CSF2P04141 144 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 PRNPP04156 253 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 CTSLP07711 333 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 HSP90AA1P07900 732 aaKnown RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 SLC2A3P11169 496 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 CCR1P32246 355 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 GPD2P43304 727 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 RPL34P49207 117 aaKnown RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 KRT83P78385 493 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 SKOR1P84550 965 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 CDK17Q00537 523 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 CLN3Q13286 438 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 NR0B2Q15466 257 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 ARSIQ5FYB1 569 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 C6orf132Q5T0Z8 1188 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 SEL1L3Q68CR1 1132 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 OR6B2Q6IFH4 312 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 CXorf57Q6NSI4 855 aaKnown RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 FBXL22Q6P050 247 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 GUSBP11Q6P575 273 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 CRTC1Q6UUV9 634 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 KRBA2Q6ZNG9 492 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 GCNT7Q6ZNI0 430 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 USP53Q70EK8 1073 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 ERN2Q76MJ5 926 aaKnown RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 EXD3Q8N9H8 876 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 ZNF548Q8NEK5 533 aaPredicted RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 TMIEQ8NEW7 156 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 LMX1AQ8TE12 382 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 GLMNQ92990 594 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 ALG14Q96F25 216 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 PRR11Q96HE9 360 aaPredicted RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 BMFQ96LC9 184 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 SPATA32Q96LK8 384 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 MED15Q96RN5 788 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 CCNL2Q96S94 520 aaPredicted RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 IL12RB2Q99665 862 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 PRMT1Q99873 361 aaKnown RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 ARHGAP9Q9BRR9 750 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 SLC17A9Q9BYT1 436 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 MUC3BQ9H195 1237 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 FAM204AQ9H8W3 233 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 SALL4Q9UJQ4 1053 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 VANGL2Q9ULK5 521 aa8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 ZFR2Q9UPR6 939 aaKnown RBP8.13□□□□□ -1.11
NSMCE2-213ENST00000523824 CSNK1G3Q9Y6M4 447 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms