RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CBWD5Q5RIA9 395 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 RBFAQ8N0V3 343 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 IRGQQ8WZA9 623 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 AZIN2Q96A70 460 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 SGF29Q96ES7 293 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 IL12RB2Q99665 862 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 CCDC3Q9BQI4 270 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 FOXP3Q9BZS1 431 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 MUC3BQ9H195 1237 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 TNKS2Q9H2K2 1166 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 GULP1Q9UBP9 304 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 KLF15Q9UIH9 416 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 TRAF3IP3Q9Y228 551 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 CCDC187A0A096LP49 1063 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 A0A1B0GVL5 298 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 K7ERQ8 282 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 MCF2LO15068 1137 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 MAPK13O15264 365 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 RAD51BO15315 384 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 AQP9O43315 295 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 SUV39H1O43463 412 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 PAK4O96013 591 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 JUNDP17535 347 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 RPL13P26373 211 aaKnown RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 ADKP55263 362 aaKnown RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 YWHAEP62258 255 aaKnown RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 PITX1P78337 314 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 SKOR1P84550 965 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 SULT2A1Q06520 285 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 PDE1CQ14123 709 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 FZD2Q14332 565 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 ARSIQ5FYB1 569 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 TPRG1LQ5T0D9 272 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 B3GNT8Q7Z7M8 397 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 FBXO39Q8N4B4 442 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 ATP11CQ8NB49 1132 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 CHST14Q8NCH0 376 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 OR52K2Q8NGK3 314 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 SLC35F5Q8WV83 523 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 JPH3Q8WXH2 748 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 ERCC4Q92889 916 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 BMFQ96LC9 184 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 RPRD1AQ96P16 312 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 IRX2Q9BZI1 471 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 TCEAL2Q9H3H9 227 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 STARD5Q9NSY2 213 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 SIRPGQ9P1W8 387 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 PISDQ9UG56 409 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 ATXN7L1Q9ULK2 861 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-211ENST00000523441 PCDHGA8Q9Y5G5 932 aa11.93□□□□□ -0.5
SDCBP-211ENST00000523441 SNAP91O60641 907 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 MT-CO1P00395 513 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 EPB41P11171 864 aaKnown RBP11.92□□□□□ -0.5
SDCBP-211ENST00000523441 RRM1P23921 792 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 CHRNA3P32297 505 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 GTF2H1P32780 548 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 RABGAP1LQ5R372 815 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 MANEAQ5SRI9 462 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 CXorf57Q6NSI4 855 aaKnown RBP11.92□□□□□ -0.5
SDCBP-211ENST00000523441 LCLAT1Q6UWP7 414 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 LINGO4Q6UY18 593 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 C14orf80Q86SX3 495 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 SMYD4Q8IYR2 804 aaPredicted RBP11.92□□□□□ -0.5
SDCBP-211ENST00000523441 SH2D3CQ8N5H7 860 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 ATP6V0D2Q8N8Y2 350 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 CCDC47Q96A33 483 aaKnown RBP11.92□□□□□ -0.5
SDCBP-211ENST00000523441 FAM131CQ96AQ9 280 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 SLC39A13Q96H72 371 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 ZSWIM1Q9BR11 485 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 FAM204AQ9H8W3 233 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 USP29Q9HBJ7 922 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 SEPT3Q9UH03 358 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 VANGL2Q9ULK5 521 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 PAXBP1Q9Y5B6 917 aa11.92□□□□□ -0.5
SDCBP-211ENST00000523441 RNF225M0QZC1 329 aaPredicted RBP11.91□□□□□ -0.5
SDCBP-211ENST00000523441 PLD2O14939 933 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 ATP9BO43861 1147 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 STX10O60499 249 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 FBXO21O94952 628 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 TRUB2O95900 331 aaKnown RBP11.91□□□□□ -0.5
SDCBP-211ENST00000523441 CSF2P04141 144 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 NTRK1P04629 796 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 ITGA2BP08514 1039 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 JMJD7P0C870 316 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 SRCP12931 536 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 NME1P15531 152 aaKnown RBP11.91□□□□□ -0.5
SDCBP-211ENST00000523441 ITGB6P18564 788 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 UGT1A5P35504 534 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 DNA2P51530 1060 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 PDX1P52945 283 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 SLC12A1Q13621 1099 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 UBAP2LQ14157 1087 aaKnown RBP11.91□□□□□ -0.5
SDCBP-211ENST00000523441 IGFBP7Q16270 282 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 TBR1Q16650 682 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 SKIDA1Q1XH10 827 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 PRRT3Q5FWE3 981 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 IGF2-ASQ6U949 168 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 RAB11FIP2Q7L804 512 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 ABI3BPQ7Z7G0 1075 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms