RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 ENC1O14682 589 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 ZNF821O75541 412 aaPredicted RBP12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 ZMPSTE24O75844 475 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 PRNPP04156 253 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 CTSLP07711 333 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 PNMA6AP0CW24 399 aaPredicted RBP12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 ZNF18P17022 549 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 RNASE9P60153 205 aaKnown RBP12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 NRG1Q02297 640 aaPredicted RBP12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 STAT4Q14765 748 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 DPCR1Q3MIW9 517 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 SETMARQ53H47 684 aaPredicted RBP12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 TCP11X2Q5H9J9 407 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 PIP5KL1Q5T9C9 394 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 Q6ZVU0 165 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 GATAD2AQ86YP4 633 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 TMEM145Q8NBT3 493 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 FAM174AQ8TBP5 190 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 ENOX1Q8TC92 643 aaKnown RBP12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 CEP44Q9C0F1 390 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 MUC3BQ9H195 1237 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 PDCL3Q9H2J4 239 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 VPS51Q9UID3 782 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 RALYQ9UKM9 306 aaKnown RBP12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 LHX6Q9UPM6 363 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 FHOD1Q9Y613 1164 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 ZFYVE26Q68DK2 2539 aa12.95□□□□□ -0.34
TOP1MT-217ENST00000523417 CACNA1GO43497 2377 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 A0A0D9SEW6 157 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 PLK4O00444 970 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 SNAP91O60641 907 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 CYP1A1P04798 512 aaPredicted RBP12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 RHOCP08134 193 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 FLT3P36888 993 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 SULT1E1P49888 294 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 IL9RQ01113 521 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 BNIP3Q12983 259 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 FAM102AQ5T9C2 384 aaPredicted RBP12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 TRNP1Q6NT89 227 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 NOP9Q86U38 636 aaKnown RBP12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 ATP11CQ8NB49 1132 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 MSANTD4Q8NCY6 345 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 MDM1Q8TC05 714 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 RFFLQ8WZ73 363 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 IFT43Q96FT9 208 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 CNDP2Q96KP4 475 aaKnown RBP12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 OSBPL2Q9H1P3 480 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 SAMSN1Q9NSI8 373 aaKnown RBP12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 HS3ST3A1Q9Y663 406 aa12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 COL5A1P20908 1838 aaPredicted RBP12.94□□□□□ -0.34
TOP1MT-217ENST00000523417 A0A087WV48 116 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 F8VZ95 297 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 K7ERQ8 282 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 SMAD6O43541 496 aaKnown RBP12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 RFPL3O75679 317 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 CKMT2P17540 419 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 MMP8P22894 467 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 OR1E1P30953 314 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 ADRA1BP35368 520 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 ACADVLP49748 655 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 NOMO3P69849 1222 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 RAPGEF1Q13905 1077 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 ZNF284Q2VY69 593 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 RETSATQ6NUM9 610 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 DHRS13Q6UX07 377 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 ERN2Q76MJ5 926 aaKnown RBP12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 ZSCAN30Q86W11 494 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 HORMAD1Q86X24 394 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 DCP2Q8IU60 420 aaKnown RBP12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 EID2Q8N6I1 236 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 EPS8L1Q8TE68 723 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 CENPIQ92674 756 aaPredicted RBP12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 ISG20Q96AZ6 181 aaKnown RBP12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 KLHDC7BQ96G42 594 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 ZYG11BQ9C0D3 744 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 KLHL11Q9NVR0 708 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 MPP6Q9NZW5 540 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 NOCTQ9UK39 431 aaKnown RBP12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 ACACAQ13085 2346 aa12.93□□□□□ -0.34
TOP1MT-217ENST00000523417 SPEGQ15772 3267 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 LRRC10BA6NIK2 292 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 GOLGA8CPA6NN73 597 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 AP1G1O43747 822 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 CD160O95971 181 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 APC2O95996 2303 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 RRM1P23921 792 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 ACP1P24666 158 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 MAT2AP31153 395 aaKnown RBP12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 GGCXP38435 758 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 CDR2Q01850 454 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 CYP4F3Q08477 520 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 ZNF211Q13398 564 aaPredicted RBP12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 PROX2Q3B8N5 592 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 TMEM259Q4ZIN3 620 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 MANEALQ5VSG8 457 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 CDKAL1Q5VV42 579 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 FBXL19Q6PCT2 694 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 DPY19L3Q6ZPD9 716 aa12.92□□□□□ -0.34
TOP1MT-217ENST00000523417 SLC25A45Q8N413 288 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms