RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 KIF21BO75037 1637 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 BAZ1AQ9NRL2 1556 aaPredicted RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 ARHGEF17Q96PE2 2063 aaPredicted RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 DHX57Q6P158 1386 aaKnown RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 CYP2D7A0A087X1C5 515 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 CXorf65A6NEN9 183 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 VGLL3A8MV65 326 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 MSI1O43347 362 aaKnown RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 FCGR2AP12318 317 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 CERS1P27544 350 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 CHRNA5P30532 468 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 GGT5P36269 586 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 PAFAH1B1P43034 410 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 CCT4P50991 539 aaKnown RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 CDH15P55291 814 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 GEMIN4P57678 1058 aaKnown RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 CFHR1Q03591 330 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 STIM1Q13586 685 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 PGM5Q15124 567 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 CEP78Q5JTW2 689 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 FAM171A1Q5VUB5 890 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 DPY19L2P1Q6NXN4 242 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 SLC22A25Q6T423 547 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 LRIG3Q6UXM1 1119 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 ARMC8Q8IUR7 673 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 ADGRF4Q8IZF3 695 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 TMEM217Q8N7C4 229 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 SETD9Q8NE22 299 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 TNIP2Q8NFZ5 429 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 CNOT9Q92600 299 aaKnown RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 HDAC2Q92769 488 aaKnown RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 FRMD8Q9BZ67 464 aaPredicted RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 LMAN2LQ9H0V9 348 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 BEX4Q9NWD9 120 aaPredicted RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 PPP1R14DQ9NXH3 145 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 PTGFRNQ9P2B2 879 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 KLHL13Q9P2N7 655 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 SLC25A10Q9UBX3 287 aaPredicted RBP7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 OSGIN2Q9Y236 505 aa7.12□□□□□ -1.27
NUDCD1-204ENST00000521439 GOLGA3Q08378 1498 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 BAZ1BQ9UIG0 1483 aaKnown RBP7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 RPGRIP1LQ68CZ1 1315 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 GAGE10A6NGK3 116 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 TEX22C9J3V5 150 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 PPP6CO00743 305 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 TNPO2O14787 897 aaKnown RBP7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 TSPAN4O14817 238 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 STRNO43815 780 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 CHRM4P08173 479 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 SLC18A3Q16572 532 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 C5orf22Q49AR2 442 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 ZNF766Q5HY98 468 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 CYB5R4Q7L1T6 521 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 NEK8Q86SG6 692 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 RAB40AQ8WXH6 277 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 KAT2AQ92830 837 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 FAM210AQ96ND0 272 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 EYA3Q99504 573 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 SEMA4CQ9C0C4 833 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 TMX4Q9H1E5 349 aaPredicted RBP7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 FLRT1Q9NZU1 646 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 HCN3Q9P1Z3 774 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 DHDHQ9UQ10 334 aa7.11□□□□□ -1.27
NUDCD1-204ENST00000521439 DPPA5A6NC42 116 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 OR6C68A6NDL8 312 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 PER2O15055 1255 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 TBX18O95935 607 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 F9P00740 461 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 FBLP22087 321 aaKnown RBP7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 MPGP29372 298 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 CYP2J2P51589 502 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 GHRHRQ02643 423 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 LMOD3Q0VAK6 560 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 PRICKLE4Q2TBC4 344 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 SLC9C1Q4G0N8 1177 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 UBAP2Q5T6F2 1119 aaKnown RBP7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 FAM69AQ5T7M9 428 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 FAM180BQ6P0A1 224 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 DSTYKQ6XUX3 929 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 FAM57BQ71RH2 274 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 MON1AQ86VX9 555 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 NOC3LQ8WTT2 800 aaKnown RBP7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 FRG2BQ96QU4 278 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 PIMREGQ9BSJ6 248 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 SCNM1Q9BWG6 230 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 EPHX3Q9H6B9 360 aa7.1□□□□□ -1.27
NUDCD1-204ENST00000521439 SPTLC2O15270 562 aa7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 RBMXL2O75526 392 aaKnown RBP7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 SKIV2L2P42285 1042 aaKnown RBP7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 C1orf122Q6ZSJ8 110 aa7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 H1FNTQ75WM6 255 aaPredicted RBP7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 RPAINQ86UA6 219 aa7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 SH2D3AQ9BRG2 576 aa7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 IFT27Q9BW83 186 aa7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 TTYH1Q9H313 450 aaPredicted RBP7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 VEZTQ9HBM0 779 aa7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 SEMA4BQ9NPR2 832 aaPredicted RBP7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 ICKQ9UPZ9 632 aa7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 CNPY2Q9Y2B0 182 aa7.09□□□□□ -1.27
NUDCD1-204ENST00000521439 CEP164Q9UPV0 1460 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms