RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ALDH1A3P47895 512 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 SLC11A2P49281 568 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 GLUD2P49448 558 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 ZNF135P52742 658 aaPredicted RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 ACLYP53396 1101 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 CACNA2D1P54289 1103 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 WNT3AP56704 352 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 SERINC5Q86VE9 423 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 SUGP1Q8IWZ8 645 aaKnown RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 DENND1AQ8TEH3 1009 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 C10orf82Q8WW14 230 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 TMA16Q96EY4 203 aaKnown RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 GBA3Q9H227 469 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 NME7Q9Y5B8 376 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 PRRC2BQ5JSZ5 2229 aaKnown RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 UTRNP46939 3433 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 FAM95CA0A1B0GW59 222 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ZBBXA8MT70 800 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 C9IYK1 514 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 NDUFS3O75489 264 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ZMPSTE24O75844 475 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 CABYRO75952 493 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 MPOP05164 745 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 CHRNA4P43681 627 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 GPR15P49685 360 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 PDE1CQ14123 709 aaPredicted RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 LPIN1Q14693 890 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 UPP1Q16831 310 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 CCDC153Q494R4 210 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 MAP3K21Q5TCX8 1036 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 FSTL4Q6MZW2 842 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ZNF280BQ86YH2 543 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 SCUBE1Q8IWY4 988 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 DDIASQ8IXT1 998 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 DBF4BQ8NFT6 615 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 CASP10Q92851 521 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 EXOC2Q96KP1 924 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 TEKT5Q96M29 485 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 NUF2Q9BZD4 464 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 VCXQ9H320 206 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ENTPD7Q9NQZ7 604 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 TBC1D13Q9NVG8 400 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 NDE1Q9NXR1 346 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 COL11A1P12107 1806 aaPredicted RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 E5RI56 91 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 AOC2O75106 756 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 DDHD2O94830 711 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 LUC7L3O95232 432 aaKnown RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 ITGB1P05556 798 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 AP2B1P63010 937 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ZBTB17Q13105 803 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 NOGQ13253 232 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ZNF177Q13360 481 aaPredicted RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 KPNB1Q14974 876 aaKnown RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 BRMS1LQ5PSV4 323 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 VWA5B1Q5TIE3 1220 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 SEL1L3Q68CR1 1132 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 CIR1Q86X95 450 aaPredicted RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 CXorf38Q8TB03 319 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ZNF398Q8TD17 642 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ACMSDQ8TDX5 336 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 INPP5DQ92835 1189 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 NTAN1Q96AB6 310 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 TMEM169Q96HH4 297 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 PPP1R2P1Q96PQ5 205 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 SERPINI1Q99574 410 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 CINPQ9BW66 212 aaPredicted RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 ZYG11BQ9C0D3 744 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 SLC39A8Q9C0K1 460 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 MTMR10Q9NXD2 777 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 IGSF9Q9P2J2 1179 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 BCAP29Q9UHQ4 241 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ZMYND8Q9ULU4 1186 aaPredicted RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 E9PAM4 449 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 GABBR2O75899 941 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 PIGNO95427 931 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 APOA4P06727 396 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ABCE1P61221 599 aaKnown RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 WASHC5Q12768 1159 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 ESRP1Q6NXG1 681 aaKnown RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 ALKAL1Q6UXT8 129 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 PPWD1Q96BP3 646 aaKnown RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 TSPAN17Q96FV3 270 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 ACE2Q9BYF1 805 aaPredicted RBP10.32□□□□□ -0.76
MCF2-209ENST00000520602 CDYLQ9Y232 598 aa10.32□□□□□ -0.76
MCF2-209ENST00000520602 TNS1Q9HBL0 1735 aaKnown RBP10.31□□□□□ -0.76
MCF2-209ENST00000520602 FAM159BA6NKW6 160 aa10.31□□□□□ -0.76
MCF2-209ENST00000520602 PRR5-ARHGAP8B1AHC4 643 aa10.31□□□□□ -0.76
MCF2-209ENST00000520602 TLR5O60602 858 aa10.31□□□□□ -0.76
MCF2-209ENST00000520602 SMIM24O75264 130 aa10.31□□□□□ -0.76
MCF2-209ENST00000520602 PRKCHP24723 683 aa10.31□□□□□ -0.76
MCF2-209ENST00000520602 SERPINH1P50454 418 aaKnown RBP10.31□□□□□ -0.76
MCF2-209ENST00000520602 NUDT2P50583 147 aa10.31□□□□□ -0.76
MCF2-209ENST00000520602 ARHGAP8P85298 464 aa10.31□□□□□ -0.76
MCF2-209ENST00000520602 TAZQ16635 292 aa10.31□□□□□ -0.76
MCF2-209ENST00000520602 DEFB115Q30KQ5 88 aa10.31□□□□□ -0.76
MCF2-209ENST00000520602 ACCSLQ4AC99 568 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms