RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 TMEM51Q9NW97 253 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 ADAM22Q9P0K1 906 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 IL36AQ9UHA7 158 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 TPX2Q9ULW0 747 aaKnown RBP16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 OR51B4Q9Y5P0 310 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 LAMA1P25391 3075 aa16.52■□□□□ 0.23
IGHV3-42-201ENST00000520410 TMEM131Q92545 1883 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 A0A1B0GTQ1 180 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 I6L893 689 aaPredicted RBP16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 WNT9AO14904 365 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 RNGTTO60942 597 aaKnown RBP16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 PCDH8O95206 1070 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 PRNPP04156 253 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 C5orf22Q49AR2 442 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 CCDC183Q5T5S1 534 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 AGBL4Q5VU57 503 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 SCYL2Q6P3W7 929 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 JOSD2Q8TAC2 188 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 NT5C3BQ969T7 300 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 C1orf74Q96LT6 269 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 HAPLN3Q96S86 360 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 DNAI1Q9UI46 699 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 TMEM59LQ9UK28 342 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 PPM1HQ9ULR3 514 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 HS3ST2Q9Y278 367 aa16.51■□□□□ 0.23
IGHV3-42-201ENST00000520410 DRGXA6NNA5 263 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 LGALS16A8MUM7 142 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 TLR4O00206 839 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 SLC31A1O15431 190 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 SMAD6O43541 496 aaKnown RBP16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 TNFSF14O43557 240 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 MAGEC1O60732 1142 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 MBD3O95983 291 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 CYP1A1P04798 512 aaPredicted RBP16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 C7P10643 843 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 KRT3P12035 628 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 PRLRP16471 622 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 DESP17661 470 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 CHRNB2P17787 502 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 MMP8P22894 467 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 CLCN6P51797 869 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 JAM2P57087 298 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 GNA12Q03113 381 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 RAB6CQ53S08 254 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 ARSIQ5FYB1 569 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 DNAJC24Q6P3W2 148 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 CLEC17AQ6ZS10 378 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 GLRX5Q86SX6 157 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 EID2Q8N6I1 236 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 CHST14Q8NCH0 376 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 FAM172AQ8WUF8 416 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 TMEM121BQ9BXQ6 578 aaPredicted RBP16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 TM6SF2Q9BZW4 377 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 RAB6CQ9H0N0 254 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 KDM4CQ9H3R0 1056 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 ZDHHC6Q9H6R6 413 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 OR12D3Q9UGF7 316 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 CA5BQ9Y2D0 317 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 SIK3Q9Y2K2 1263 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 FCF1Q9Y324 198 aaKnown RBP16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 DAAM1Q9Y4D1 1078 aa16.5■□□□□ 0.23
IGHV3-42-201ENST00000520410 A0A1W2PQU0 124 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 ILVBLA1L0T0 632 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 YKT6O15498 198 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 PCDHGA12O60330 932 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 LDOC1O95751 146 aaPredicted RBP16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 CALB1P05937 261 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 CTSLP07711 333 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 GPD1P21695 349 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 VASPP50552 380 aaPredicted RBP16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 NXPH1P58417 271 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 CCDC14Q49A88 953 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 LEKR1Q6ZMV7 388 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 ZNF683Q8IZ20 524 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 OXR1Q8N573 874 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 KDF1Q8NAX2 398 aaPredicted RBP16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 OR2A12Q8NGT7 310 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 BAHD1Q8TBE0 780 aaPredicted RBP16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 ARRDC3Q96B67 414 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 TBC1D31Q96DN5 1066 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 CNDP2Q96KP4 475 aaKnown RBP16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 CALN1Q9BXU9 219 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 PREBQ9HCU5 417 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 FZD3Q9NPG1 666 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 LIMA1Q9UHB6 759 aaKnown RBP16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 HPCAL4Q9UM19 191 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 DMTF1Q9Y222 760 aa16.49■□□□□ 0.23
IGHV3-42-201ENST00000520410 IGLV3-10A0A075B6K4 115 aa16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 A0A1W2PR77 199 aa16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 PRAMEF26H0Y7S4 382 aa16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 ENC1O14682 589 aa16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 SDC3O75056 442 aa16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 LEFTY1O75610 366 aa16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 EPHA8P29322 1005 aaPredicted RBP16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 ETFBP38117 255 aa16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 SERPINH1P50454 418 aaKnown RBP16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 SCAPQ12770 1279 aa16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 CLEC16AQ2KHT3 1053 aa16.48■□□□□ 0.23
IGHV3-42-201ENST00000520410 HS1BP3Q53T59 392 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms