RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ACCSQ96QU6 501 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CLPBQ9H078 707 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 IFT80Q9P2H3 777 aaPredicted RBP13.78□□□□□ -0.2
PABPC1-208ENST00000519004 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 BMP4P12644 408 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 OSBPP22059 807 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 ARL1P40616 181 aaPredicted RBP13.78□□□□□ -0.2
PABPC1-208ENST00000519004 NAMPTP43490 491 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 RHBDL3P58872 404 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 PPP4CP60510 307 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 PSME3P61289 254 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CTAG1AP78358 180 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CYP4A22Q5TCH4 519 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 IRAK1BP1Q5VVH5 260 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 NAPRTQ6XQN6 538 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 ENOSF1Q7L5Y1 443 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 ASCC1Q8N9N2 400 aaKnown RBP13.78□□□□□ -0.2
PABPC1-208ENST00000519004 TDRD5Q8NAT2 981 aaKnown RBP13.78□□□□□ -0.2
PABPC1-208ENST00000519004 AGR3Q8TD06 166 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 SEPT8Q92599 483 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 FKBP14Q9NWM8 211 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
PABPC1-208ENST00000519004 TMEM216Q9P0N5 145 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 KIAA1257Q9ULG3 409 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 SLC15A5A6NIM6 579 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 E7ENX8 843 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 C6orf229H3BNL8 230 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 TOR1BO14657 336 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 SNPHO15079 494 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 TRIM24O15164 1050 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 PHGDHO43175 533 aaKnown RBP13.77□□□□□ -0.21
PABPC1-208ENST00000519004 RFPL2O75678 378 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 FKBP9O95302 570 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 HSPA4LO95757 839 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 MX2P20592 715 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 SLC26A2P50443 739 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 TRAP1Q12931 704 aaKnown RBP13.77□□□□□ -0.21
PABPC1-208ENST00000519004 SNRNP35Q16560 246 aaKnown RBP13.77□□□□□ -0.21
PABPC1-208ENST00000519004 TMEM198Q66K66 360 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 SLC16A12Q6ZSM3 486 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 ABRAQ8N0Z2 381 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 CNTD1Q8N815 330 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 ATL1Q8WXF7 558 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 PPP1R36Q96LQ0 422 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 MCEEQ96PE7 176 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 YTHDF1Q9BYJ9 559 aaKnown RBP13.77□□□□□ -0.21
PABPC1-208ENST00000519004 ZBTB26Q9HCK0 441 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 PTPRFP10586 1907 aa13.77□□□□□ -0.21
PABPC1-208ENST00000519004 CHMP2AO43633 222 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 TMCC2O75069 709 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 KCNK2O95069 426 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 EPHX2P34913 555 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 PLA2G16P53816 162 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 RACK1P63244 317 aaKnown RBP13.76□□□□□ -0.21
PABPC1-208ENST00000519004 PPP2R2BQ00005 443 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 RALGDSQ12967 914 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 FXNQ16595 210 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 QRICH1Q2TAL8 776 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 C6orf10Q5SRN2 563 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 TREML2Q5T2D2 321 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 TWF2Q6IBS0 349 aaKnown RBP13.76□□□□□ -0.21
PABPC1-208ENST00000519004 TFAP2DQ7Z6R9 452 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 OSTM1Q86WC4 334 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 ZCCHC7Q8N3Z6 543 aaKnown RBP13.76□□□□□ -0.21
PABPC1-208ENST00000519004 PCDH20Q8N6Y1 951 aaKnown RBP13.76□□□□□ -0.21
PABPC1-208ENST00000519004 BEND7Q8N7W2 519 aaPredicted RBP13.76□□□□□ -0.21
PABPC1-208ENST00000519004 DEPDC1BQ8WUY9 529 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 OSCP1Q8WVF1 389 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 PBXIP1Q96AQ6 731 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 SP140LQ9H930 580 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 MRGBPQ9NV56 204 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 KCND2Q9NZV8 630 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 DCDC2Q9UHG0 476 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 TRPC5Q9UL62 973 aaPredicted RBP13.76□□□□□ -0.21
PABPC1-208ENST00000519004 EIF3LQ9Y262 564 aaKnown RBP13.76□□□□□ -0.21
PABPC1-208ENST00000519004 PCDHA1Q9Y5I3 950 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 TCRBV5S1A1TA0A578 114 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 LRRIQ4A6NIV6 560 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 AREL1O15033 823 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 SYNCRIPO60506 623 aaKnown RBP13.76□□□□□ -0.21
PABPC1-208ENST00000519004 STAM2O75886 525 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 KRT6AP02538 564 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 KRT6BP04259 564 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 GARTP22102 1010 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 ENPP1P22413 925 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 CNTFP26441 200 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 SREBF1P36956 1147 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 GMPRP36959 345 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 ZNF135P52742 658 aaPredicted RBP13.76□□□□□ -0.21
PABPC1-208ENST00000519004 GALK2Q01415 458 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 C19orf57Q0VDD7 668 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 FSTL1Q12841 308 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 SLC13A2Q13183 592 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 NPTX1Q15818 432 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 TAZQ16635 292 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 SMTNL2Q2TAL5 461 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 KCTD1Q719H9 257 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms