RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 DNAAF3Q8N9W5 541 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 TDRD5Q8NAT2 981 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 BRI3BPQ8WY22 251 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 HDAC11Q96DB2 347 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 CELF6Q96J87 481 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 GPR78Q96P69 363 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 COLEC11Q9BWP8 271 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 C20orf96Q9NUD7 363 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 RNF181Q9P0P0 153 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 DOCK3Q8IZD9 2030 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 C9IYK1 514 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 PHGDHO43175 533 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 STRNO43815 780 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 SMIM24O75264 130 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 LRIG2O94898 1065 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 FBXO21O94952 628 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 NCAM1P13591 858 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 SERPINB5P36952 375 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 HCAR3P49019 387 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 PGFP49763 221 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 GJA9P57773 515 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 CCNA1P78396 465 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 ASPHQ12797 758 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 MPP3Q13368 585 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 LSM12Q3MHD2 195 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 DENND5AQ6IQ26 1287 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 DPP9Q86TI2 863 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 SIX6OS1Q8N1H7 587 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 CMTM5Q96DZ9 223 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 PGAP3Q96FM1 320 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 TEKT5Q96M29 485 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 GPR22Q99680 433 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 APBA2Q99767 749 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 RTP3Q9BQQ7 232 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 FTHL17Q9BXU8 183 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 ABHD16BQ9H3Z7 469 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 LRRC4Q9HBW1 653 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 TXNDC16Q9P2K2 825 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 STAP1Q9ULZ2 295 aa8.61□□□□□ -1.03
CTNNA1-210ENST00000518825 CACNG3O60359 315 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 TRIM13O60858 407 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 HSPA4LO95757 839 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 MT-CYBP00156 380 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 MSX2P35548 267 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 AVPR1AP37288 418 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 GLRBP48167 497 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 TPI1P60174 286 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 ARL13AQ5H913 290 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 FAM35AQ86V20 835 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 DENND6AQ8IWF6 608 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 KLHDC8BQ8IXV7 354 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 PNPLA1Q8N8W4 532 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 GDPD5Q8WTR4 605 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 ACE2Q9BYF1 805 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 UNKQ9C0B0 810 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 DDIT4Q9NX09 232 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 BFARQ9NZS9 450 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 OR12D3Q9UGF7 316 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 SLC39A10Q9ULF5 831 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 SSX2IPQ9Y2D8 614 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 TMEM114B3SHH9 223 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 HAS3O00219 553 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 AHCYL1O43865 530 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 PGK1P00558 417 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 JCHAINP01591 159 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 MPOP05164 745 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 PIM1P11309 404 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 RAG1P15918 1043 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 YBX3P16989 372 aaKnown RBP eCLIP8.6□□□□□ -1.034e-8■□□□□ 8.9
CTNNA1-210ENST00000518825 GRIA4P48058 902 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 CLCNKBP51801 687 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 EIF4EBP2Q13542 120 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 MFSD10Q14728 455 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 C6orf163Q5TEZ5 329 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 IQSEC1Q6DN90 963 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 TSC22D3Q99576 134 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 PTPN18Q99952 460 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 RTKNQ9BST9 563 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 DNAI2Q9GZS0 605 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 DRC3Q9H069 523 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 TKTL2Q9H0I9 626 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 VCXQ9H320 206 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 PAPOLBQ9NRJ5 636 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 NDFIP2Q9NV92 336 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 CDY2AQ9Y6F7 541 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 CDY1Q9Y6F8 540 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 TMEM233B4DJY2 109 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 NEMP1O14524 444 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 CASQ2O14958 399 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 AP1G2O75843 785 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 FAM200BP0CF97 657 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 TFEBP19484 476 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 AXLP30530 894 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 ARCN1P48444 511 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 CXCR3P49682 368 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 IRX1P78414 480 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 MS4A2Q01362 244 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 PM20D1Q6GTS8 502 aa8.6□□□□□ -1.03
CTNNA1-210ENST00000518825 ZNF280DQ6N043 979 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms