RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 MTAPQ13126 283 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 CYTH1Q15438 398 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 KCTD19Q17RG1 926 aaPredicted RBP12.07□□□□□ -0.48
AP3B1-203ENST00000517940 SLC13A5Q86YT5 568 aaPredicted RBP12.07□□□□□ -0.48
AP3B1-203ENST00000517940 CCDC50Q8IVM0 306 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 PGBD5Q8N414 524 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 RASGEF1CQ8N431 466 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 SH2D3CQ8N5H7 860 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 LZTR1Q8N653 840 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 ZNF557Q8N988 423 aaPredicted RBP12.07□□□□□ -0.48
AP3B1-203ENST00000517940 TXNDC5Q8NBS9 432 aaKnown RBP12.07□□□□□ -0.48
AP3B1-203ENST00000517940 MAML1Q92585 1016 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 HDAC11Q96DB2 347 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 ERLEC1Q96DZ1 483 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 MS4A14Q96JA4 679 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 OSBPL9Q96SU4 736 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 LGMNQ99538 433 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 GABRG3Q99928 467 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 SPON2Q9BUD6 331 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 LHX3Q9UBR4 397 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
AP3B1-203ENST00000517940 SNX12Q9UMY4 172 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 FCF1Q9Y324 198 aaKnown RBP12.07□□□□□ -0.48
AP3B1-203ENST00000517940 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.07□□□□□ -0.48
AP3B1-203ENST00000517940 SIT1Q9Y3P8 196 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 RAD54BQ9Y620 910 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 STON1Q9Y6Q2 735 aa12.07□□□□□ -0.48
AP3B1-203ENST00000517940 APOC4-APOC2K7ER74 178 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 KLF8O95600 359 aaPredicted RBP12.06□□□□□ -0.48
AP3B1-203ENST00000517940 APOC2P02655 101 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 ASLP04424 464 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 C7P10643 843 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 TGM2P21980 687 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 CLCN5P51795 746 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 OXCT1P55809 520 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 ETF1P62495 437 aaKnown RBP12.06□□□□□ -0.48
AP3B1-203ENST00000517940 MRPS21P82921 87 aaKnown RBP12.06□□□□□ -0.48
AP3B1-203ENST00000517940 SATB1Q01826 763 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 PPIDQ08752 370 aaKnown RBP12.06□□□□□ -0.48
AP3B1-203ENST00000517940 ZBTB17Q13105 803 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 PRKD1Q15139 912 aaPredicted RBP12.06□□□□□ -0.48
AP3B1-203ENST00000517940 NOMO1Q15155 1222 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 FBXO43Q4G163 708 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 IL31Q6EBC2 164 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 ACTL9Q8TC94 416 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 ATG4AQ8WYN0 398 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 PTPRN2Q92932 1015 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 ACDQ96AP0 544 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 TSGA13Q96PP4 275 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 NELL2Q99435 816 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 C2orf49Q9BVC5 232 aaPredicted RBP12.06□□□□□ -0.48
AP3B1-203ENST00000517940 MMP17Q9ULZ9 603 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 MRPS17Q9Y2R5 130 aaKnown RBP12.06□□□□□ -0.48
AP3B1-203ENST00000517940 HEY1Q9Y5J3 304 aa12.06□□□□□ -0.48
AP3B1-203ENST00000517940 NUMA1Q14980 2115 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 BPTFQ12830 3046 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 ARHGAP42A6NI28 874 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 K7ESF4 209 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 PDE2AO00408 941 aaPredicted RBP12.05□□□□□ -0.48
AP3B1-203ENST00000517940 TIMM44O43615 452 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 TMCC1O94876 653 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 CTSLP07711 333 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 SRPRAP08240 638 aaKnown RBP12.05□□□□□ -0.48
AP3B1-203ENST00000517940 SERPINB6P35237 376 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 DEKP35659 375 aaKnown RBP12.05□□□□□ -0.48
AP3B1-203ENST00000517940 METAP1P53582 386 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 COPAP53621 1224 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 OTUD4Q01804 1114 aaKnown RBP12.05□□□□□ -0.48
AP3B1-203ENST00000517940 IL10RBQ08334 325 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 SLC10A7Q0GE19 358 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 LRRC32Q14392 662 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 HNRNPA1L2Q32P51 320 aaKnown RBP12.05□□□□□ -0.48
AP3B1-203ENST00000517940 C9orf64Q5T6V5 341 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 C22orf39Q6P5X5 142 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 SYT10Q6XYQ8 523 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 Q6ZVU0 165 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 ADAT2Q7Z6V5 191 aaKnown RBP12.05□□□□□ -0.48
AP3B1-203ENST00000517940 CREG2Q8IUH2 290 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 SYNPOQ8N3V7 929 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 FBXL6Q8N531 539 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 TEX26Q8N6G2 289 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 CNTD1Q8N815 330 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 KDM1BQ8NB78 822 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 CHST14Q8NCH0 376 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 SLC35B2Q8TB61 432 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 KCNV2Q8TDN2 545 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 UBE2Q2Q8WVN8 375 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 PBXIP1Q96AQ6 731 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 C16orf45Q96MC5 204 aaPredicted RBP12.05□□□□□ -0.48
AP3B1-203ENST00000517940 QKIQ96PU8 341 aaKnown RBP eCLIP12.05□□□□□ -0.482e-9■■■■■ 40.3
AP3B1-203ENST00000517940 SLC6A17Q9H1V8 727 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 PRDM16Q9HAZ2 1276 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 CD93Q9NPY3 652 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 PLXND1Q9Y4D7 1925 aa12.05□□□□□ -0.48
AP3B1-203ENST00000517940 LAMA1P25391 3075 aa12.04□□□□□ -0.48
AP3B1-203ENST00000517940 CXorf51AA0A1B0GTR3 108 aa12.04□□□□□ -0.48
AP3B1-203ENST00000517940 GPR37L1O60883 481 aa12.04□□□□□ -0.48
AP3B1-203ENST00000517940 SIN3BO75182 1162 aa12.04□□□□□ -0.48
AP3B1-203ENST00000517940 ATP5BP06576 529 aaKnown RBP12.04□□□□□ -0.48
AP3B1-203ENST00000517940 ZFXP17010 805 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms