RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 EIF2B3Q9NR50 452 aaKnown RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 SCN3BQ9NY72 215 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 C2CD4BA6NLJ0 364 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 M0QZ92 97 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 INPP4BO15327 924 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 MAFO75444 373 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 KRT75O95678 551 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 SLC4A1P02730 911 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 COL6A2P12110 1019 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 NELFEP18615 380 aaKnown RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 CDH2P19022 906 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 TFEBP19484 476 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 MAPK1P28482 360 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 CDH5P33151 784 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 THOP1P52888 689 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 CYP51A1Q16850 503 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 DCAF4L1Q3SXM0 396 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 BROXQ5VW32 411 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ZYG11AQ6WRX3 759 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 C15orf39Q6ZRI6 1047 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 CCDC80Q76M96 950 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 SFRP1Q8N474 314 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 RNF139Q8WU17 664 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 GATA5Q9BWX5 397 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 NOL11Q9H8H0 719 aaKnown RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 WDR37Q9Y2I8 494 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 DHRS12A0PJE2 317 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 IQCA1LA6NCM1 817 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 SPATA31C2B4DYI2 1134 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 KCNK1O00180 336 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 JAK1P23458 1154 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ARL2P36404 184 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 PNPLA4P41247 253 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 SLC26A2P50443 739 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ILF2Q12905 390 aaKnown RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 TLR1Q15399 786 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 RBBP7Q16576 425 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 SLC9B1Q4ZJI4 515 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 PDCD4Q53EL6 469 aaKnown RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 TMTC4Q5T4D3 741 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF280DQ6N043 979 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 EPGNQ6UW88 154 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 METTL7BQ6UX53 244 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 UNC5BQ8IZJ1 945 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 MIER2Q8N344 545 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 PDPRQ8NCN5 879 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 AGBL3Q8NEM8 1001 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 CLEC4DQ8WXI8 215 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 IFT43Q96FT9 208 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ABHD8Q96I13 439 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ASB2Q96Q27 587 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 HAPLN3Q96S86 360 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 CIB1Q99828 191 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 MRPL57Q9BQC6 102 aaKnown RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 SIK2Q9H0K1 926 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 COQ10BQ9H8M1 238 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 SELENONQ9NZV5 590 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 LAMB1P07942 1786 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 FAM95CA0A1B0GW59 222 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 CILPO75339 1184 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 TADA2AO75478 443 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 F9P00740 461 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 JCHAINP01591 159 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 XRCC1P18887 633 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ABCG1P45844 678 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ACADVLP49748 655 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 BACE1P56817 501 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 GBE1Q04446 702 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 NSUN2Q08J23 767 aaKnown RBP eCLIP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 KRR1Q13601 381 aaKnown RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 MTX3Q5HYI7 312 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF618Q5T7W0 954 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 LCLAT1Q6UWP7 414 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ANKLE1Q8NAG6 615 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ANKRD52Q8NB46 1076 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 LRRN4Q8WUT4 740 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 LPGAT1Q92604 370 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 TOP1MTQ969P6 601 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 LGMNQ99538 433 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 RAD21L1Q9H4I0 556 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 SCHIP1Q9P0W5 487 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 RCOR3Q9P2K3 495 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 KANSL3Q9P2N6 904 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 PRKAG2Q9UGJ0 569 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ANAPC2Q9UJX6 822 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 TNFSF13BQ9Y275 285 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 MAST2Q6P0Q8 1798 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 BTBD19C9JJ37 291 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 USP12O75317 370 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 TGFB3P10600 412 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 FGF3P11487 239 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 TPH1P17752 444 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 HARS2P49590 506 aaKnown RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF132P52740 706 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 DEFA1P59665 94 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 DEFA3P59666 94 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 TRAP1Q12931 704 aaKnown RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 MYBPC3Q14896 1274 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 SV2CQ496J9 727 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ARL13AQ5H913 290 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms