RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 TLE6Q9H808 572 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 SERHLQ9NQF3 203 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 KRT84Q9NSB2 600 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 COMMD8Q9NX08 183 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 TRHDEQ9UKU6 1024 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 FMN2Q9NZ56 1722 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 MAGEB16A2A368 324 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 TRMUO75648 421 aaKnown RBP12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 ERVK-10P10266 1014 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 UQCRBP14927 111 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 GSCP56915 257 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 DDR2Q16832 855 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 TFDP3Q5H9I0 405 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 AGAP9Q5VTM2 703 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 FAM46CQ5VWP2 391 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 SLC24A5Q71RS6 500 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 ATG16L2Q8NAA4 619 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 SPPL2BQ8TCT7 592 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 HELQQ8TDG4 1101 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 PRKD2Q9BZL6 878 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 LRRC40Q9H9A6 602 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 ST3GAL5Q9UNP4 418 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 DYRK1BQ9Y463 629 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 MRC1P22897 1456 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 PHLPP1O60346 1717 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 PSMD10O75832 226 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 PRKAA1Q13131 559 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 PRAMEF19Q5SWL8 479 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 ATAD3BQ5T9A4 648 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 RIPOR1Q6ZS17 1223 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 LRRC49Q8IUZ0 686 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 LRRC52Q8N7C0 313 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 TDRD5Q8NAT2 981 aaKnown RBP12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 RXFP2Q8WXD0 754 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 KLHL32Q96NJ5 620 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 DGCR6LQ9BY27 220 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 PDGFDQ9GZP0 370 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 MAN1C1Q9NR34 630 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 MARCH2Q9P0N8 246 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 DNMT3LQ9UJW3 386 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 EFCAB10A6NFE3 127 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 SUPT3HB4E1H0 165 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 PTGES3LE9PB15 166 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 UBDO15205 165 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 LYPLA2O95372 231 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 LTFP02788 710 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 STK32CQ86UX6 486 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 NAT14Q8WUY8 206 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 NMRK2Q9NPI5 230 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 WWOXQ9NZC7 414 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 GUCY1B2O75343 617 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 TGM2P21980 687 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 RPL21P46778 160 aaKnown RBP12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 GLUD2P49448 558 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 THOP1P52888 689 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 TRAP1Q12931 704 aaKnown RBP12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 TUSC3Q13454 348 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 SH3BP5LQ7L8J4 393 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 SGF29Q96ES7 293 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 C12orf42Q96LP6 360 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 INPP4AQ96PE3 977 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 NINJ2Q9NZG7 142 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 NCKIPSDQ9NZQ3 722 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 CCDC59Q9P031 241 aaKnown RBP12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 GPC6Q9Y625 555 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 NFAT5O94916 1531 aa12.43□□□□□ -0.42
PCDHGA6-201ENST00000517434 INPP4BO15327 924 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 ONECUT3O60422 494 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 SHOX2O60902 331 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 SUPT7LO94864 414 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PROSCO94903 275 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 BMP10O95393 424 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 CXCL14O95715 111 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 IL6P05231 212 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 MAPK1P28482 360 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 ADSSP30520 456 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PPP3CCP48454 512 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 FOLH1Q04609 750 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 TTC23Q5W5X9 447 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 TUBA3EQ6PEY2 450 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 C11orf88Q6PI97 169 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 ISLR2Q6UXK2 745 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 KRT74Q7RTS7 529 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 EXD1Q8NHP7 514 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 BTN2A2Q8WVV5 523 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 RIPOR3Q96MK2 946 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 POPDC2Q9HBU9 364 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PTTG2Q9NZH5 202 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 CRNNQ9UBG3 495 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 ZMYM5Q9UJ78 669 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 FAM47E-STBD1D6RA91 191 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 FGF10O15520 208 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 ALOX15P16050 662 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 LRPAP1P30533 357 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PTPN7P35236 360 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 GRM5P41594 1212 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 CDK7P50613 346 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 LGALS3BPQ08380 585 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PUDPQ08623 228 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 C11orf63Q6NUN7 778 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms