RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 PGAM1P18669 254 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 RPS24P62847 133 aaKnown RBP20.49■□□□□ 0.87
TRIO-223ENST00000515710 GNA12Q03113 381 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 ZNF177Q13360 481 aaPredicted RBP20.49■□□□□ 0.87
TRIO-223ENST00000515710 TMED2Q15363 201 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 SETD3Q86TU7 594 aaPredicted RBP20.49■□□□□ 0.87
TRIO-223ENST00000515710 DNAAF3Q8N9W5 541 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 ADAMTS19Q8TE59 1207 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 SLC22A17Q8WUG5 538 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 PAFAH2Q99487 392 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 CORO1BQ9BR76 489 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 SLC25A51Q9H1U9 297 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 PLAC1Q9HBJ0 212 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.49■□□□□ 0.87
TRIO-223ENST00000515710 NYNRINQ9P2P1 1898 aaKnown RBP20.49■□□□□ 0.87
TRIO-223ENST00000515710 LSM7Q9UK45 103 aaKnown RBP20.49■□□□□ 0.87
TRIO-223ENST00000515710 ILVBLA1L0T0 632 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 PRAMEF11O60813 436 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 MYL4P12829 197 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 MYOGP15173 224 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 PTPN2P17706 415 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 HOXA9P31269 272 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 ACVRL1P37023 503 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 CASC4Q6P4E1 433 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 Q6ZNB5 142 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 MAB21L3Q8N8X9 362 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 PABPC5Q96DU9 382 aaKnown RBP20.49■□□□□ 0.87
TRIO-223ENST00000515710 TGS1Q96RS0 853 aaKnown RBP20.49■□□□□ 0.87
TRIO-223ENST00000515710 SENP1Q9P0U3 644 aa20.49■□□□□ 0.87
TRIO-223ENST00000515710 SHROOM3Q8TF72 1996 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 MAGEB16A2A368 324 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 GREM1O60565 184 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 ARHGEF15O94989 841 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 C1QAP02745 245 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 EPHA5P54756 1037 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 CDH17Q12864 832 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 CAMK1Q14012 370 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 KBTBD12Q3ZCT8 623 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 C9orf50Q5SZB4 431 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 SLC44A1Q8WWI5 657 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 ZNF419Q96HQ0 510 aaPredicted RBP20.48■□□□□ 0.87
TRIO-223ENST00000515710 MAN1C1Q9NR34 630 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 UBP1Q9NZI7 540 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 SAMD15Q9P1V8 674 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 TBC1D30Q9Y2I9 924 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 IKBKGQ9Y6K9 419 aa20.48■□□□□ 0.87
TRIO-223ENST00000515710 A0A1W2PRU2 124 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 TSPAN3O60637 253 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 CLASP2O75122 1294 aaKnown RBP20.47■□□□□ 0.87
TRIO-223ENST00000515710 CSPG5O95196 566 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 CKMP06732 381 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 DDX6P26196 483 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRIO-223ENST00000515710 IRS1P35568 1242 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 GNGT1P63211 74 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 SLC10A7Q0GE19 358 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 MPP3Q13368 585 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 EFTUD2Q15029 972 aaKnown RBP eCLIP20.47■□□□□ 0.871e-5■■■□□ 15.7
TRIO-223ENST00000515710 HTR3DQ70Z44 454 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 FAM217AQ8IXS0 508 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 SPATA22Q8NHS9 363 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 DCAKDQ8WVC6 231 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 SELENOSQ9BQE4 189 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 SYBUQ9NX95 663 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 MOCS1Q9NZB8 636 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 DPP7Q9UHL4 492 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 GRXCR1A8MXD5 290 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 USP12O75317 370 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 ALDH1A2O94788 518 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 RHOCP08134 193 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 HNRNPA1P09651 372 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRIO-223ENST00000515710 ETFBP38117 255 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 ERVK-21P61565 698 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 LBRQ14739 615 aaKnown RBP20.47■□□□□ 0.87
TRIO-223ENST00000515710 TMCO4Q5TGY1 634 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 ZNF783Q6ZMS7 281 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 PRPF39Q86UA1 669 aaKnown RBP20.47■□□□□ 0.87
TRIO-223ENST00000515710 TRABD2AQ86V40 505 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 LEMD2Q8NC56 503 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 TTC17Q96AE7 1141 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 MRRFQ96E11 262 aaKnown RBP20.47■□□□□ 0.87
TRIO-223ENST00000515710 TBL1YQ9BQ87 522 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 IL22Q9GZX6 179 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 NT5MQ9NPB1 228 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 HAUS2Q9NVX0 235 aa20.47■□□□□ 0.87
TRIO-223ENST00000515710 PIH1D1Q9NWS0 290 aaKnown RBP20.47■□□□□ 0.87
TRIO-223ENST00000515710 TYW5A2RUC4 315 aaKnown RBP20.46■□□□□ 0.87
TRIO-223ENST00000515710 SOBPA7XYQ1 873 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 KDELR3O43731 214 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 MT-CYBP00156 380 aaPredicted RBP20.46■□□□□ 0.87
TRIO-223ENST00000515710 POLBP06746 335 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 CA3P07451 260 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 INHBAP08476 426 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 KRT15P19012 456 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 SGSHP51688 502 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 ZXDBP98169 803 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 OLIG2Q13516 323 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 SPANXN3Q5MJ09 141 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 IL31Q6EBC2 164 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 SPRED2Q7Z698 418 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 SLC26A11Q86WA9 606 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms