RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 Q6ZVU0 165 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 PYROXD2Q8N2H3 581 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 NIPA2Q8N8Q9 360 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 ATP11CQ8NB49 1132 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 OR7D4Q8NG98 312 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 ARHGEF2Q92974 986 aaKnown RBP13.07□□□□□ -0.32
CLCN3-210ENST00000515420 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 ISG20Q96AZ6 181 aaKnown RBP13.07□□□□□ -0.32
CLCN3-210ENST00000515420 KDM4CQ9H3R0 1056 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 CAPN10Q9HC96 672 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 ZNHIT6Q9NWK9 470 aaKnown RBP13.07□□□□□ -0.32
CLCN3-210ENST00000515420 FBXL12Q9NXK8 326 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 HPCAL4Q9UM19 191 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 NENFQ9UMX5 172 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 SLC6A14Q9UN76 642 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 AP4E1Q9UPM8 1137 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 CACNA1AO00555 2505 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
CLCN3-210ENST00000515420 PATE3B3GLJ2 98 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 C10orf142B7Z368 130 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 CBX4O00257 560 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 MID1O15344 667 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 SLC7A4O43246 635 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 CREB3O43889 395 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 LRCH4O75427 683 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 MT-CO1P00395 513 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 CYP1A2P05177 515 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 VAV1P15498 845 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 PSMD8P48556 350 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 IRX4P78413 519 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 FOXK2Q01167 660 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 GFPT1Q06210 699 aaPredicted RBP13.06□□□□□ -0.32
CLCN3-210ENST00000515420 SLC18A3Q16572 532 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
CLCN3-210ENST00000515420 STPG1Q5TH74 334 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 DCAF12L1Q5VU92 463 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 IL31Q6EBC2 164 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 FAM124AQ86V42 546 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 DNAAF5Q86Y56 855 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 CNGA4Q8IV77 575 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 RGL4Q8IZJ4 473 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 UMODL1-AS1Q8N2C9 162 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 DEFB119Q8N690 84 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 ARFGAP1Q8N6T3 406 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 PCDH20Q8N6Y1 951 aaKnown RBP13.06□□□□□ -0.32
CLCN3-210ENST00000515420 TMIEQ8NEW7 156 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 OR2A12Q8NGT7 310 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 CASKIN2Q8WXE0 1202 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 OMDQ99983 421 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 MAGEB5Q9BZ81 275 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 THAP2Q9H0W7 228 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 OSGEPQ9NPF4 335 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 RXFP3Q9NSD7 469 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 NDFIP2Q9NV92 336 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 MYO1AQ9UBC5 1043 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 LCMT1Q9UIC8 334 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 PPM1HQ9ULR3 514 aa13.06□□□□□ -0.32
CLCN3-210ENST00000515420 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.06□□□□□ -0.32
CLCN3-210ENST00000515420 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
CLCN3-210ENST00000515420 A0A1B0GTW7 788 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 A0A1W2PP55 124 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 LRRC72A6NJI9 287 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 MFAP3LO75121 409 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 RNASEH2AO75792 299 aaKnown RBP13.05□□□□□ -0.32
CLCN3-210ENST00000515420 IL1BP01584 269 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 PRNPP04156 253 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 CFIP05156 583 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 SYPP08247 313 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 MIPP30301 263 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 DRD3P35462 400 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 EIF4A3P38919 411 aaKnown RBP13.05□□□□□ -0.32
CLCN3-210ENST00000515420 RECQLP46063 649 aaPredicted RBP13.05□□□□□ -0.32
CLCN3-210ENST00000515420 HCAR3P49019 387 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 NUMBP49757 651 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 TPI1P60174 286 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 ARF5P84085 180 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 CCDC15Q0P6D6 951 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 POLD3Q15054 466 aaPredicted RBP13.05□□□□□ -0.32
CLCN3-210ENST00000515420 ASTE1Q2TB18 679 aaPredicted RBP13.05□□□□□ -0.32
CLCN3-210ENST00000515420 PARP15Q460N3 678 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 CCDC122Q5T0U0 273 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 CYP4V2Q6ZWL3 525 aaPredicted RBP13.05□□□□□ -0.32
CLCN3-210ENST00000515420 DGLUCYQ7Z3D6 616 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 AADATQ8N5Z0 425 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 OR2T34Q8NGX1 318 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 C1orf216Q8TAB5 229 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 GANCQ8TET4 914 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 SPON2Q9BUD6 331 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 SNRNP25Q9BV90 132 aaKnown RBP13.05□□□□□ -0.32
CLCN3-210ENST00000515420 NUP85Q9BW27 656 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 TRIM7Q9C029 511 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 ZDHHC5Q9C0B5 715 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 NEUROG2Q9H2A3 272 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 C6orf106Q9H6K1 298 aaPredicted RBP13.05□□□□□ -0.32
CLCN3-210ENST00000515420 TMEM9BQ9NQ34 198 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 ABHD10Q9NUJ1 306 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 SERGEFQ9UGK8 458 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 IP6K2Q9UHH9 426 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms