RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SLFN11Q7Z7L1 901 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 FAM72BQ86X60 149 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D31Q96DN5 1066 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 VCPIP1Q96JH7 1222 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 MAGEB5Q9BZ81 275 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 HAUS4Q9H6D7 363 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 AIPL1Q9NZN9 384 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 PPM1HQ9ULR3 514 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 A0A1W2PPC4 97 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 GOLGA6L19H0YKK7 550 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 PLK4O00444 970 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 SMAD6O43541 496 aaKnown RBP25.05■■□□□ 1.6
SNF8-213ENST00000514929 LRIG2O94898 1065 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 PMLP29590 882 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 GRIA4P48058 902 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 MAPKAPK2P49137 400 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 FANCCQ00597 558 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 EFHC2Q5JST6 749 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 ORAI3Q9BRQ5 295 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 CNPY3Q9BT09 278 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 EDEM3Q9BZQ6 932 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 RETREG1Q9H6L5 497 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 DNAI1Q9UI46 699 aa25.05■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3DA0A087WVF3 549 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3IA0A087WXS9 549 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3EA0A087X179 549 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3KA0A087X1G2 549 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3FA6NER0 549 aaPredicted RBP25.04■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3LB9A6J9 549 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3HP0C7X1 549 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 ETFBP38117 255 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 PRKCIP41743 596 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 RECQLP46063 649 aaPredicted RBP25.04■■□□□ 1.6
SNF8-213ENST00000514929 CCR5P51681 352 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 SLC20A2Q08357 652 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 KLHL30Q0D2K2 578 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 SCAPQ12770 1279 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 HLA-BQ31612 363 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 E4F1Q66K89 784 aaPredicted RBP25.04■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3GQ6DHY5 549 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3CQ6IPX1 549 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 C22orf39Q6P5X5 142 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 TBC1D3Q8IZP1 549 aaPredicted RBP25.04■■□□□ 1.6
SNF8-213ENST00000514929 OR2A12Q8NGT7 310 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 TTYH3Q9C0H2 523 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 IL21RQ9HBE5 538 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 PARVAQ9NVD7 372 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 TMEM248Q9NWD8 314 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 ANGPTL2Q9UKU9 493 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 ANKRD6Q9Y2G4 727 aa25.04■■□□□ 1.6
SNF8-213ENST00000514929 SLC7A4O43246 635 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 RTN2O75298 545 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 ZMPSTE24O75844 475 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 CHRNA3P32297 505 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 RACK1P63244 317 aaKnown RBP25.03■■□□□ 1.6
SNF8-213ENST00000514929 CNTN1Q12860 1018 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 KIF19Q2TAC6 998 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 LAYNQ6UX15 382 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 ZNF571Q7Z3V5 609 aaPredicted RBP25.03■■□□□ 1.6
SNF8-213ENST00000514929 NLRP14Q86W24 1093 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 SLC6A18Q96N87 628 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 TNKS2Q9H2K2 1166 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 KDM4CQ9H3R0 1056 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 NDFIP2Q9NV92 336 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 TPX2Q9ULW0 747 aaKnown RBP25.03■■□□□ 1.6
SNF8-213ENST00000514929 SNX11Q9Y5W9 270 aa25.03■■□□□ 1.6
SNF8-213ENST00000514929 KPNA3O00505 521 aaPredicted RBP25.02■■□□□ 1.6
SNF8-213ENST00000514929 SH3BP5O60239 455 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 L1CAMP32004 1257 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 ACVRL1P37023 503 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 SERPINH1P50454 418 aaKnown RBP25.02■■□□□ 1.6
SNF8-213ENST00000514929 UBASH3AP57075 661 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 ARF5P84085 180 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 FIGNQ5HY92 759 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 PYROXD2Q8N2H3 581 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 FAM131CQ96AQ9 280 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 ACE2Q9BYF1 805 aaPredicted RBP25.02■■□□□ 1.6
SNF8-213ENST00000514929 EBF2Q9HAK2 575 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 DYRK4Q9NR20 520 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 TM7SF3Q9NS93 570 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 NEU3Q9UQ49 428 aa25.02■■□□□ 1.6
SNF8-213ENST00000514929 SPAARA0A1B0GVQ0 90 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 ATMINO43313 823 aaPredicted RBP25.01■■□□□ 1.59
SNF8-213ENST00000514929 PLRG1O43660 514 aaKnown RBP25.01■■□□□ 1.59
SNF8-213ENST00000514929 RAMP2O60895 175 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 PRNPP04156 253 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 CTSLP07711 333 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 ZNF883P0CG24 379 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 GZMAP12544 262 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 SKILP12757 684 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 DNA2P51530 1060 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 AIF1P55008 147 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 C21orf59P57076 290 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 SIM1P81133 766 aaPredicted RBP25.01■■□□□ 1.59
SNF8-213ENST00000514929 FOXC1Q12948 553 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 MAMLD1Q13495 774 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 HNRNPDQ14103 355 aaKnown RBP25.01■■□□□ 1.59
SNF8-213ENST00000514929 ZSCAN23Q3MJ62 389 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 AGBL4Q5VU57 503 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 TMC6Q7Z403 805 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms