RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 KDM1BQ8NB78 822 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 CYB5D2Q8WUJ1 264 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 SORCS1Q8WY21 1168 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 KRT35Q92764 455 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 SLCO2A1Q92959 643 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 FAM122AQ96E09 287 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 ALG14Q96F25 216 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 HHIPQ96QV1 700 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 TRIM7Q9C029 511 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 FAM86C1Q9NVL1 165 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 CACNA2D2Q9NY47 1150 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 MPP6Q9NZW5 540 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 PCSK1NQ9UHG2 260 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 ERVW-1Q9UQF0 538 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 R4GN57 208 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 GON4LQ3T8J9 2241 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 ILVBLA1L0T0 632 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 FAM72CH0Y354 149 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 KRIT1O00522 736 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 PSTPIP1O43586 416 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 HRO43593 1189 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 LRCH4O75427 683 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 LRIG2O94898 1065 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 FGGP02679 453 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 EPHX1P07099 455 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 RHOCP08134 193 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 MYBL2P10244 700 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 OR1E1P30953 314 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 HTR7P34969 479 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 IL12RB1P42701 662 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 MAPKAPK2P49137 400 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 VASPP50552 380 aaPredicted RBP8.52□□□□□ -1.05
CCL28-204ENST00000514421 IRAK1P51617 712 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 DRG2P55039 364 aaKnown RBP8.52□□□□□ -1.05
CCL28-204ENST00000514421 RWDD2BP57060 319 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 ZNF252P-AS1Q0IIN9 211 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 CUL1Q13616 776 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 BYSLQ13895 437 aaKnown RBP8.52□□□□□ -1.05
CCL28-204ENST00000514421 DHX34Q14147 1143 aaKnown RBP8.52□□□□□ -1.05
CCL28-204ENST00000514421 MESDQ14696 234 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 CASP8Q14790 479 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 SIX1Q15475 284 aaPredicted RBP8.52□□□□□ -1.05
CCL28-204ENST00000514421 FUT11Q495W5 492 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 FNDC3BQ53EP0 1204 aaKnown RBP8.52□□□□□ -1.05
CCL28-204ENST00000514421 FAM72AQ5TYM5 149 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 MANEALQ5VSG8 457 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 RNF219Q5W0B1 726 aaPredicted RBP8.52□□□□□ -1.05
CCL28-204ENST00000514421 FAM72DQ6L9T8 149 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 SERPINA13PQ6UXR4 307 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 MAATS1Q7Z4T9 603 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 FAM72BQ86X60 149 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 PYROXD2Q8N2H3 581 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 PGBD3Q8N328 593 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 MREGQ8N565 214 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 NKD2Q969F2 451 aaPredicted RBP8.52□□□□□ -1.05
CCL28-204ENST00000514421 TBC1D31Q96DN5 1066 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 MRGPRX3Q96LB0 322 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 EPAS1Q99814 870 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 MUC3BQ9H195 1237 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 TMEM245Q9H330 911 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 DONSONQ9NYP3 566 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 PCYOX1Q9UHG3 505 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 SLCO3A1Q9UIG8 710 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 ANAPC7Q9UJX3 599 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 USP18Q9UMW8 372 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 OR51B4Q9Y5P0 310 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 RAD54BQ9Y620 910 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 MIA3Q5JRA6 1907 aa8.52□□□□□ -1.05
CCL28-204ENST00000514421 TCRBV21S2A2A0A5A6 115 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 FAM187AA6NFU0 413 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 WASH4PA8MWX3 477 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 RAD51CO43502 376 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 CREB3O43889 395 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 HEXIM1O94992 359 aaKnown RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 LMNAP02545 664 aaKnown RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 PYGMP11217 842 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 HLA-EP13747 358 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 EPHB2P29323 1055 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 CHRNA3P32297 505 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 PTPN7P35236 360 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 CTSOP43234 321 aaPredicted RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 MARCKSL1P49006 195 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 HCAR3P49019 387 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 ZNF135P52742 658 aaPredicted RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 SLC20A2Q08357 652 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 CAMK2GQ13555 558 aaPredicted RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 SIM2Q14190 667 aaPredicted RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 HADHQ16836 314 aaKnown RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 ANO7Q6IWH7 933 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 KIAA1211LQ6NV74 962 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 TFAP2DQ7Z6R9 452 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 NLRP14Q86W24 1093 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 TMPRSS6Q8IU80 811 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 KATNAL2Q8IYT4 538 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 MDGA1Q8NFP4 955 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 OR52K2Q8NGK3 314 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 HMGB4Q8WW32 186 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 GAB3Q8WWW8 586 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 MYO19Q96H55 970 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms