RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 ZFP37Q9Y6Q3 630 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 MYH15Q9Y2K3 1946 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 C19orf67A6NJJ6 358 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 PRRT4C9JH25 899 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CNTN5O94779 1100 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CYP1A2P05177 515 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 SLC11A2P49281 568 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 ZNF75DP51815 510 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 PMS2P54278 862 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 BPIFB4P59827 614 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 SKOR1P84550 965 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 DMC1Q14565 340 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 EML3Q32P44 896 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CCDC38Q502W7 563 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 TMTC4Q5T4D3 741 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 DEPDC1BQ8WUY9 529 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 SLC35F5Q8WV83 523 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 XPO6Q96QU8 1125 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CHP1Q99653 195 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 STK33Q9BYT3 514 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 OSBPL6Q9BZF3 934 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CAAP1Q9H8G2 361 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 ABCC13Q9NSE7 274 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 WNT16Q9UBV4 365 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 FAF1Q9UNN5 650 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 FRYQ5TBA9 3013 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 TTC24A2A3L6 582 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 ECI2O75521 394 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 PSMA2P25787 234 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CTSOP43234 321 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 ITKQ08881 620 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 MESDQ14696 234 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 FSCBQ5H9T9 825 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 NUGGCQ68CJ6 796 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 TBC1D1Q86TI0 1168 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CCDC13Q8IYE1 715 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 LEMD2Q8NC56 503 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 PDZD8Q8NEN9 1154 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 WDR60Q8WVS4 1066 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 DESI2Q9BSY9 194 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CALN1Q9BXU9 219 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 PACSIN1Q9BY11 444 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CEP44Q9C0F1 390 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 POPDC2Q9HBU9 364 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 CNOT8Q9UFF9 292 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 SLC12A6Q9UHW9 1150 aa8.08□□□□□ -1.12
LIMCH1-219ENST00000514096 ZNF292O60281 2723 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 EFCAB8A8MWE9 144 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 HHLA1C9JL84 531 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 NEMP1O14524 444 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 BUB1O43683 1085 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 SNAP91O60641 907 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 OAS1P00973 400 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 PCNAP12004 261 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 CD70P32970 193 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 AMPD2Q01433 879 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 CASP8Q14790 479 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 CFAP157Q5JU67 520 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 SH2D4BQ5SQS7 431 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 CDKAL1Q5VV42 579 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 CHST9Q7L1S5 443 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 LRRC8AQ8IWT6 810 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 PRSS33Q8NF86 280 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 SUN5Q8TC36 379 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 FAM172AQ8WUF8 416 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 HIC2Q96JB3 615 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 PNKPQ96T60 521 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 FAM118BQ9BPY3 351 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 CARD9Q9H257 536 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 FAM53CQ9NYF3 392 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 SCML2Q9UQR0 700 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 APC2O95996 2303 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 PATE3B3GLJ2 98 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 F5H5T6 163 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 STMND1H3BQB6 276 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 KPNA3O00505 521 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 C1RP00736 705 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 ACADMP11310 421 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 GLDCP23378 1020 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 EIF4A3P38919 411 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 ST8SIA6P61647 398 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 ZNF77Q15935 545 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 PCSK7Q16549 785 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 KIAA1211LQ6NV74 962 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 WDR59Q6PJI9 974 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 ZBTB8BQ8NAP8 495 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 OR7D4Q8NG98 312 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 HDAC7Q8WUI4 952 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 NKD2Q969F2 451 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 AGAP3Q96P47 875 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 AGPAT1Q99943 283 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 FAM83CQ9BQN1 747 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 HSD3B7Q9H2F3 369 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 PIGVQ9NUD9 493 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 CFAP47Q6ZTR5 3102 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 ARPC4-TTLL3A0A0A6YYG9 625 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 E7EVH7 732 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 K7ERQ8 282 aa8.07□□□□□ -1.12
LIMCH1-219ENST00000514096 DFFAO00273 331 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms