RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TRPM5Q9NZQ8 1165 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 SOX13Q9UN79 622 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 RRP15Q9Y3B9 282 aaKnown RBP15.22■□□□□ 0.03
VCAN-211ENST00000513984 ALPK3Q96L96 1907 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.22■□□□□ 0.03
VCAN-211ENST00000513984 ZCWPW2A0A1B0GU75 182 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 F5H5T6 163 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 COCHO43405 550 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 ACSL4O60488 711 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 GJB5O95377 273 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 MT-CYBP00156 380 aaPredicted RBP15.22■□□□□ 0.03
VCAN-211ENST00000513984 DHRS4L1P0CG22 281 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 ADRA1DP25100 572 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 ADRA1AP35348 466 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 PPM1AP35813 382 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 ETV4P43268 484 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 RENBPP51606 427 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 YBEYP58557 167 aaPredicted RBP15.22■□□□□ 0.03
VCAN-211ENST00000513984 BMPR2Q13873 1038 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 ANKRD20A4Q4UJ75 823 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 FAM133BQ5BKY9 247 aaKnown RBP15.22■□□□□ 0.03
VCAN-211ENST00000513984 PACS1Q6VY07 963 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 NECAB2Q7Z6G3 386 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 RASSF3Q86WH2 238 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 PLD4Q96BZ4 506 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 SLC17A7Q9P2U7 560 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 MAFFQ9ULX9 164 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 GOLGA6L7A0A1B0GV03 622 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 RAMP2O60895 175 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 NEBLO76041 1014 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 ACRP10323 421 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 PPP3CCP48454 512 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 MPP3Q13368 585 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 VEPH1Q14D04 833 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 SEPT7Q16181 437 aaKnown RBP15.21■□□□□ 0.03
VCAN-211ENST00000513984 CES3Q6UWW8 571 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 TCEAL8Q8IYN2 117 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 TEX26Q8N6G2 289 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 ANKS4BQ8N8V4 417 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 AZIN2Q96A70 460 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 MYEOVQ96EZ4 313 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 KIFC1Q9BW19 673 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 NACA2Q9H009 215 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 SLC25A51Q9H1U9 297 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 VPS11Q9H270 941 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 SP110Q9HB58 689 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 ENTPD7Q9NQZ7 604 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 ZFATQ9P243 1243 aa15.21■□□□□ 0.03
VCAN-211ENST00000513984 J3KR12 359 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 COPEO14579 308 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 ATP9BO43861 1147 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 ERVK-10P10266 1014 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 SLC6A4P31645 630 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 SLC11A2P49281 568 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 HARS2P49590 506 aaKnown RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 IL10RBQ08334 325 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 IFT88Q13099 833 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 PLD1Q13393 1074 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 SERINC3Q13530 473 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 POLD3Q15054 466 aaPredicted RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 ZKSCAN8Q15776 578 aaPredicted RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 MROH9Q5TGP6 573 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 DENND5AQ6IQ26 1287 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 CIR1Q86X95 450 aaPredicted RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 LGI2Q8N0V4 545 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 IPMKQ8NFU5 416 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 LRRC8CQ8TDW0 803 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 PSMG2Q969U7 264 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 GRAMD1AQ96CP6 724 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 SRPK1Q96SB4 655 aaKnown RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 YME1L1Q96TA2 773 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 CPNE1Q99829 537 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.2■□□□□ 0.02
VCAN-211ENST00000513984 MRPL17Q9NRX2 175 aaKnown RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 SLC17A6Q9P2U8 582 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 PSAT1Q9Y617 370 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 MTCL1Q9Y4B5 1905 aaKnown RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 TPH1P17752 444 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 OR1E1P30953 314 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 GP5P40197 560 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 TWF1Q12792 350 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 MARC1Q5VT66 337 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 CGB2Q6NT52 195 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 ACMSDQ8TDX5 336 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 MFSD3Q96ES6 412 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 IMP4Q96G21 291 aaKnown RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 MRGPRX2Q96LB1 330 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 FICDQ9BVA6 458 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 C12orf65Q9H3J6 166 aaKnown RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 IL23AQ9NPF7 189 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 CHRAC1Q9NRG0 131 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 UXTQ9UBK9 157 aaPredicted RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 STK39Q9UEW8 545 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 USP15Q9Y4E8 981 aaPredicted RBP15.2■□□□□ 0.02
VCAN-211ENST00000513984 INSL5Q9Y5Q6 135 aa15.2■□□□□ 0.02
VCAN-211ENST00000513984 MKI67P46013 3256 aaKnown RBP15.19■□□□□ 0.02
VCAN-211ENST00000513984 PRRG1O14668 218 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 LILRB3O75022 631 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 STC2O76061 302 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 KIAA0754O94854 1291 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms