RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 RAB21Q9UL25 225 aa10.15□□□□□ -0.78
CCL28-203ENST00000513525 WASF3Q9UPY6 502 aa10.15□□□□□ -0.78
CCL28-203ENST00000513525 SPEGQ15772 3267 aa10.15□□□□□ -0.78
CCL28-203ENST00000513525 AKAP13Q12802 2813 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 CCDC151A5D8V7 595 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 FOXN3O00409 490 aaPredicted RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 CES2O00748 559 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 HSF2BPO75031 334 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 PALMO75781 387 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 MOCS2O96007 188 aaPredicted RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 TMEM253P0C7T8 217 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 SLC2A3P11169 496 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 TNFAIP3P21580 790 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 MCM3P25205 808 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 USP8P40818 1118 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 CSKP41240 450 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 SMCPP49901 116 aaPredicted RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 ST8SIA6P61647 398 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 RPS14P62263 151 aaKnown RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 PITX1P78337 314 aaPredicted RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 MTA1Q13330 715 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 SLC14A1Q13336 389 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 CDH18Q13634 790 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 TCEAL1Q15170 157 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 DCAF6Q58WW2 860 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 ZC3H12AQ5D1E8 599 aaKnown RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 TTC39BQ5VTQ0 682 aaPredicted RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 DCAF12L1Q5VU92 463 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 TMCO3Q6UWJ1 677 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 CACUL1Q86Y37 369 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 CCDC117Q8IWD4 279 aaPredicted RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 FAM71AQ8IYT1 594 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 SYCE1Q8N0S2 351 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 CARNMT1Q8N4J0 409 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 ZNF366Q8N895 744 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 ATP6V0D2Q8N8Y2 350 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 DEFB124Q8NES8 71 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 MRGPRX3Q96LB0 322 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 OSBPL9Q96SU4 736 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 PRMT1Q99873 361 aaKnown RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 AGPAT1Q99943 283 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 GTPBP2Q9BX10 602 aaKnown RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 TLR10Q9BXR5 811 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 PACSIN1Q9BY11 444 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 PARD6BQ9BYG5 372 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 XPO7Q9UIA9 1087 aaKnown RBP10.14□□□□□ -0.79
CCL28-203ENST00000513525 SCML1Q9UN30 329 aa10.14□□□□□ -0.79
CCL28-203ENST00000513525 COL5A1P20908 1838 aaPredicted RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 TARSL2A2RTX5 802 aaKnown RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 GRID2IPA4D2P6 1211 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 KCNU1A8MYU2 1149 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 F5H5T6 163 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 BUB1O43683 1085 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 DNTTP04053 509 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 SRPRAP08240 638 aaKnown RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 PNMA6AP0CW24 399 aaPredicted RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 CD59P13987 128 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 TACR2P21452 398 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 MAOBP27338 520 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 CCR1P32246 355 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 SNX16P57768 344 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 BPIFB4P59827 614 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 GRIK2Q13002 908 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 SLC12A1Q13621 1099 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 HNRNPDQ14103 355 aaKnown RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 TAF5Q15542 800 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 HNRNPA1L2Q32P51 320 aaKnown RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 TTC31Q49AM3 519 aaPredicted RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 FSCBQ5H9T9 825 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 PITRM1Q5JRX3 1037 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 MEI1Q5TIA1 1274 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 RAP1GAP2Q684P5 730 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 ZNF776Q68DI1 518 aaPredicted RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 OLFML1Q6UWY5 402 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 FAM183BPQ6ZVS7 135 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 SLC26A9Q7LBE3 791 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 CHSY1Q86X52 802 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 CREG2Q8IUH2 290 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 PASD1Q8IV76 773 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 LGI2Q8N0V4 545 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 DEFB106AQ8N104 65 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 CFAP52Q8N1V2 620 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 ZCCHC9Q8N567 271 aaKnown RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 C1orf216Q8TAB5 229 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 HNRNPLLQ8WVV9 542 aaKnown RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 RSPH9Q9H1X1 276 aaPredicted RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 ANKZF1Q9H8Y5 726 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 TOR4AQ9NXH8 423 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 KIAA1522Q9P206 1035 aaPredicted RBP10.13□□□□□ -0.79
CCL28-203ENST00000513525 SLC12A6Q9UHW9 1150 aa10.13□□□□□ -0.79
CCL28-203ENST00000513525 A0A1B0GVM2 712 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ANKRD62A6NC57 917 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 TCAF2A6NFQ2 919 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 H0Y626 953 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 BCAT2O15382 392 aaPredicted RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 SRGAP2O75044 1071 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ERLIN1O75477 346 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 DAB1O75553 588 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ZNF883P0CG24 379 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 GZMAP12544 262 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms