RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PAGE1O75459 146 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 DAB1O75553 588 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 GP1BAP07359 652 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 ALPPL2P10696 532 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 VAV1P15498 845 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-216ENST00000512683 AKT2P31751 481 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 CHRNA3P32297 505 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 USP8P40818 1118 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 MTIF2P46199 727 aaKnown RBP12.88□□□□□ -0.35
VEGFA-216ENST00000512683 DUSP3P51452 185 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-216ENST00000512683 PITX1P78337 314 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-216ENST00000512683 MAN2A1Q16706 1144 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 MIIPQ5JXC2 388 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 OR6B2Q6IFH4 312 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 OLFML1Q6UWY5 402 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 HORMAD1Q86X24 394 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 FAM181AQ8N9Y4 354 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 ATP11CQ8NB49 1132 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 OR4C6Q8NH72 309 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 PPP1R16AQ96I34 528 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 NPY6RQ99463 290 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 DUSP23Q9BVJ7 150 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 MUC3BQ9H195 1237 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 PRORYQ9H606 182 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 NCKIPSDQ9NZQ3 722 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 M0QYT0 321 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 THEGLP0DJG4 465 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 SRCP12931 536 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 HNRNPA2B1P22626 353 aaKnown RBP12.87□□□□□ -0.35
VEGFA-216ENST00000512683 GLDCP23378 1020 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 DGKAP23743 735 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 MAT2AP31153 395 aaKnown RBP12.87□□□□□ -0.35
VEGFA-216ENST00000512683 RECQLP46063 649 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-216ENST00000512683 TAS2R38P59533 333 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 SEMG2Q02383 582 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 C19orf57Q0VDD7 668 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 KCNMA1Q12791 1236 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 NME3Q13232 169 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 ZNF284Q2VY69 593 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 HSP90AA4PQ58FG1 418 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 PIP5KL1Q5T9C9 394 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 RETSATQ6NUM9 610 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 ARCQ7LC44 396 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 SLC25A45Q8N413 288 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 DCAF4L2Q8NA75 395 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 TMEM35BQ8NCS4 154 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 OR2A12Q8NGT7 310 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 FEM1CQ96JP0 617 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 ZNF578Q96N58 590 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-216ENST00000512683 HAPLN3Q96S86 360 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 CEP44Q9C0F1 390 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 NDST4Q9H3R1 872 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 SYNCQ9H7C4 482 aa12.87□□□□□ -0.35
VEGFA-216ENST00000512683 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.87□□□□□ -0.354e-6■□□□□ 10.5
VEGFA-216ENST00000512683 PLXNB3Q9ULL4 1909 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 COL5A1P20908 1838 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 IGLV3-10A0A075B6K4 115 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 TEX51A0A1B0GUA7 166 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 A0A1W2PQU0 124 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 ILVBLA1L0T0 632 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 CBX4O00257 560 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 FOXN3O00409 490 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 TRIM38O00635 465 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 ATXN7O15265 892 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 SIGLEC6O43699 453 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 MT-CO3P00414 261 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 RHOCP08134 193 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 PNMA6AP0CW24 399 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 CKMT1AP12532 417 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 CDH5P33151 784 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 CLCN1P35523 988 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 GABRB2P47870 512 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 INSM1Q01101 510 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 TPD52L1Q16890 204 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 SLC25A52Q3SY17 297 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 VWA3BQ502W6 1294 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 FAM183BPQ6ZVS7 135 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 Q6ZVU0 165 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 ERN2Q76MJ5 926 aaKnown RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 ABI3BPQ7Z7G0 1075 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 CIR1Q86X95 450 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 FAM71AQ8IYT1 594 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 ASB12Q8WXK4 309 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 C18orf8Q96DM3 657 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 WBP1Q96G27 269 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 BBC3Q96PG8 261 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 TUBGCP2Q9BSJ2 902 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 TKTL2Q9H0I9 626 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 SIK2Q9H0K1 926 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 SAMSN1Q9NSI8 373 aaKnown RBP12.86□□□□□ -0.35
VEGFA-216ENST00000512683 NLGN3Q9NZ94 848 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 DNAJC12Q9UKB3 198 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
VEGFA-216ENST00000512683 SYNJ2BP-COX16A0A087WUM0 186 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 KPNA3O00505 521 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 SCAMP1O15126 338 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 SLC31A1O15431 190 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms