RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 LPCAT4Q643R3 524 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 IQSEC1Q6DN90 963 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 SCIMPQ6UWF3 145 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 LRRC8DQ7L1W4 858 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 AMIGO2Q86SJ2 522 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 SLC44A2Q8IWA5 706 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 CENPLQ8N0S6 344 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 GPC2Q8N158 579 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 LZICQ8WZA0 190 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 FIG4Q92562 907 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 TMEM169Q96HH4 297 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 PDGFDQ9GZP0 370 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 ATP13A1Q9HD20 1204 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 MORF4L1Q9UBU8 362 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 RAP2CQ9Y3L5 183 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 KCPQ6ZWJ8 1503 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 DHX15O43143 795 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 CCNT2O60583 730 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 PEX11AO75192 247 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 MBL2P11226 248 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 HLA-DPA1P20036 260 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ITGALP20701 1170 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 DNAJB2P25686 324 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 MZF1P28698 734 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 SOAT1P35610 550 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 VAC14Q08AM6 782 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 FRG1Q14331 258 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 TRIM16LQ309B1 348 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 SLC44A4Q53GD3 710 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ZNF280DQ6N043 979 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 LBX2Q6XYB7 198 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 RNF180Q86T96 592 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 HPS6Q86YV9 775 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 FBXW8Q8N3Y1 598 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 PTGR2Q8N8N7 351 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 FAM120BQ96EK7 910 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 SERAC1Q96JX3 654 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ADAM2Q99965 735 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 PAIP1Q9H074 479 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 DYRK4Q9NR20 520 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 TRPM5Q9NZQ8 1165 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 RPL26L1Q9UNX3 145 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 MYRFQ9Y2G1 1151 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 BAZ2AQ9UIF9 1905 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 H0YGN5 161 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 MFSD11O43934 449 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 S100A5P33763 92 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ADRA1BP35368 520 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 GRM5P41594 1212 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 C16orf72Q14CZ0 275 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 PGS1Q32NB8 556 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ZC3H12BQ5HYM0 836 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 PIWIL4Q7Z3Z4 852 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 ANKS1BQ7Z6G8 1248 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 LGI2Q8N0V4 545 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 PYROXD2Q8N2H3 581 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 OR52K2Q8NGK3 314 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 NIFKQ9BYG3 293 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 TAS2R1Q9NYW7 299 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ZMYM5Q9UJ78 669 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ADAM28Q9UKQ2 775 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 CORO1CQ9ULV4 474 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 PCDHGC3Q9UN70 934 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 KCNH4Q9UQ05 1017 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 PCDHB5Q9Y5E4 795 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 RAD54BQ9Y620 910 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 NFS1Q9Y697 457 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 SPEF2Q9C093 1822 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 MYH8P13535 1937 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 CPSF4O95639 269 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 LTA4HP09960 611 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 NELFEP18615 380 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 MPSTP25325 297 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 YWHAQP27348 245 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 PIK3R1P27986 724 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 ATXN1P54253 815 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 UBE3AQ05086 875 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 CCDC15Q0P6D6 951 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 MSLNQ13421 630 aaPredicted RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 TRIM60Q495X7 471 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 PKN3Q6P5Z2 889 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 TSHZ1Q6ZSZ6 1077 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 TDRPQ86YL5 185 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 KIAA2013Q8IYS2 634 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 DHRSXQ8N5I4 330 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 LRRC52Q8N7C0 313 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 ADGRE3Q9BY15 652 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 CADM1Q9BY67 442 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 DPY30Q9C005 99 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 SENP6Q9GZR1 1112 aaPredicted RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 FBXO44Q9H4M3 255 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 ELOVL6Q9H5J4 265 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 PARVBQ9HBI1 364 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 IMPAD1Q9NX62 359 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 POLG2Q9UHN1 485 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 PAIP2BQ9ULR5 123 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 MAFBQ9Y5Q3 323 aaPredicted RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 NRCAMQ92823 1304 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 PTGES3LE9PB15 166 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 CABYRO75952 493 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms