RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 NAP1L5Q96NT1 182 aaPredicted RBP6.59□□□□□ -1.35
CLDND1-225ENST00000512147 SPRTNQ9H040 489 aaPredicted RBP6.59□□□□□ -1.35
CLDND1-225ENST00000512147 XYLT2Q9H1B5 865 aa6.59□□□□□ -1.35
CLDND1-225ENST00000512147 LHX5Q9H2C1 402 aa6.59□□□□□ -1.35
CLDND1-225ENST00000512147 DNAJC17Q9NVM6 304 aaKnown RBP6.59□□□□□ -1.35
CLDND1-225ENST00000512147 UCKL1Q9NWZ5 548 aa6.59□□□□□ -1.35
CLDND1-225ENST00000512147 TLK1Q9UKI8 766 aa6.59□□□□□ -1.35
CLDND1-225ENST00000512147 ITGA11Q9UKX5 1188 aa6.59□□□□□ -1.35
CLDND1-225ENST00000512147 COQ4Q9Y3A0 265 aa6.59□□□□□ -1.35
CLDND1-225ENST00000512147 LOXL2Q9Y4K0 774 aa6.59□□□□□ -1.35
CLDND1-225ENST00000512147 TIMM13Q9Y5L4 95 aaPredicted RBP6.59□□□□□ -1.35
CLDND1-225ENST00000512147 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.59□□□□□ -1.35
CLDND1-225ENST00000512147 U3KQA8 63 aa6.59□□□□□ -1.35
CLDND1-225ENST00000512147 A0A1B0GTH6 734 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 TARSL2A2RTX5 802 aaKnown RBP6.58□□□□□ -1.36
CLDND1-225ENST00000512147 C2orf78A6NCI8 922 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 LGALS16A8MUM7 142 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 C9orf172C9J069 976 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 PRRT4C9JH25 899 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 PES1O00541 588 aaKnown RBP6.58□□□□□ -1.36
CLDND1-225ENST00000512147 SCAMP3O14828 347 aaKnown RBP6.58□□□□□ -1.36
CLDND1-225ENST00000512147 WNT9AO14904 365 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 NPC1O15118 1278 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 P4HA2O15460 535 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 TEX33O43247 280 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 HOXC11O43248 304 aaPredicted RBP6.58□□□□□ -1.36
CLDND1-225ENST00000512147 PHACTR2O75167 634 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 LRCH4O75427 683 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 SERPINC1P01008 464 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 DNAJA1P31689 397 aaKnown RBP6.58□□□□□ -1.36
CLDND1-225ENST00000512147 COPAP53621 1224 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 LILRA4P59901 499 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 MYL6P60660 151 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 MYL7Q01449 175 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 KCNMA1Q12791 1236 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 TRPC3Q13507 836 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 NR1I3Q14994 352 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 SGSM1Q2NKQ1 1148 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 DPY19L2P1Q6NXN4 242 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 C16orf46Q6P387 395 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 GUSBP11Q6P575 273 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 B3GNT8Q7Z7M8 397 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 CEP97Q8IW35 865 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 LRRC52Q8N7C0 313 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 MFSD2AQ8NA29 543 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 EHBP1Q8NDI1 1231 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 FBXL13Q8NEE6 735 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 ANKRD20A12PQ8NF67 263 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 HPDLQ96IR7 371 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 CRACR2AQ9BSW2 395 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 EFHD1Q9BUP0 239 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 B3GNT4Q9C0J1 378 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 GPN2Q9H9Y4 310 aaPredicted RBP6.58□□□□□ -1.36
CLDND1-225ENST00000512147 APOBEC3GQ9HC16 384 aaKnown RBP6.58□□□□□ -1.36
CLDND1-225ENST00000512147 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLDND1-225ENST00000512147 RAB20Q9NX57 234 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 LUZP4Q9P127 313 aa6.58□□□□□ -1.36
CLDND1-225ENST00000512147 A0A1B0GUH1 482 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 GTPBP10A4D1E9 387 aaKnown RBP6.57□□□□□ -1.36
CLDND1-225ENST00000512147 EME2A4GXA9 379 aaPredicted RBP6.57□□□□□ -1.36
CLDND1-225ENST00000512147 KPNA7A9QM74 516 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 FANCGO15287 622 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 STAU1O95793 577 aaKnown RBP6.57□□□□□ -1.36
CLDND1-225ENST00000512147 ASS1P00966 412 aaKnown RBP6.57□□□□□ -1.36
CLDND1-225ENST00000512147 TPM2P07951 284 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 GIMD1P0DJR0 217 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 SLC9A1P19634 815 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 TCN2P20062 427 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 PON1P27169 355 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 ATICP31939 592 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 PNPLA4P41247 253 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 PIK3CAP42336 1068 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 AARSP49588 968 aaKnown RBP eCLIP6.57□□□□□ -1.36
CLDND1-225ENST00000512147 TAF6P49848 677 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 PGDP52209 483 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 UBASH3AP57075 661 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 ZXDBP98169 803 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 APBA1Q02410 837 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 UBXN1Q04323 297 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 CDK18Q07002 472 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 CETN1Q12798 172 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 SFSWAPQ12872 951 aaKnown RBP6.57□□□□□ -1.36
CLDND1-225ENST00000512147 OVGP1Q12889 678 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 EXOC3L4Q17RC7 722 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 FILIP1LQ4L180 1135 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 SPOPLQ6IQ16 392 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 NAPEPLDQ6IQ20 393 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 JMJD6Q6NYC1 403 aaPredicted RBP6.57□□□□□ -1.36
CLDND1-225ENST00000512147 ZCCHC8Q6NZY4 707 aaKnown RBP6.57□□□□□ -1.36
CLDND1-225ENST00000512147 GBP6Q6ZN66 633 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 LIMS2Q7Z4I7 341 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 ZNF438Q7Z4V0 828 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 CACNA2D3Q8IZS8 1091 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 TAF4BQ92750 862 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 TATDN2Q93075 761 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 OTUB2Q96DC9 234 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 SENP8Q96LD8 212 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 ZNF560Q96MR9 790 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 TMEM74Q96NL1 305 aa6.57□□□□□ -1.36
CLDND1-225ENST00000512147 XPO6Q96QU8 1125 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms