RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 HDAC11Q96DB2 347 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 SENP7Q9BQF6 1050 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 RTKNQ9BST9 563 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 APOL6Q9BWW8 343 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 BRIP1Q9BX63 1249 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 HOMER2Q9NSB8 354 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 PAQR5Q9NXK6 330 aaPredicted RBP7.44□□□□□ -1.22
CPNE4-208ENST00000511604 MRPL39Q9NYK5 338 aaKnown RBP7.44□□□□□ -1.22
CPNE4-208ENST00000511604 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.44□□□□□ -1.22
CPNE4-208ENST00000511604 GGA3Q9NZ52 723 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 SIRPGQ9P1W8 387 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 SPATA31A1Q5TZJ5 1347 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 TCRBV7S3A2A0A539 114 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 PI4K2BG5E9Z4 385 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 PLK4O00444 970 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 DNALI1O14645 258 aaPredicted RBP7.44□□□□□ -1.22
CPNE4-208ENST00000511604 SNNO75324 88 aaPredicted RBP7.44□□□□□ -1.22
CPNE4-208ENST00000511604 SEC14L2O76054 403 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 SEMA3DO95025 777 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 OR5F1O95221 314 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 DLGAP3O95886 979 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 BMP4P12644 408 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 COX4I1P13073 169 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 CCND2P30279 289 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 PSMC2P35998 433 aaKnown RBP7.44□□□□□ -1.22
CPNE4-208ENST00000511604 CYP2J2P51589 502 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 GPR85P60893 370 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 TNK2Q07912 1038 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 MMRN1Q13201 1228 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 GALNT3Q14435 633 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 ESCO2Q56NI9 601 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 YIF1BQ5BJH7 314 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 PIGGQ5H8A4 983 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 TRAPPC3LQ5T215 181 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 ANKRD22Q5VYY1 191 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 C15orf52Q6ZUT6 534 aaKnown RBP7.44□□□□□ -1.22
CPNE4-208ENST00000511604 UNC45BQ8IWX7 931 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 PIAS4Q8N2W9 510 aaPredicted RBP7.44□□□□□ -1.22
CPNE4-208ENST00000511604 SLC22A8Q8TCC7 542 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 SLC2A14Q8TDB8 520 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 MARVELD3Q96A59 401 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 VCPIP1Q96JH7 1222 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 BEGAINQ9BUH8 593 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 ACSS3Q9H6R3 686 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 COQ3Q9NZJ6 369 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 IPO11Q9UI26 975 aaKnown RBP7.44□□□□□ -1.22
CPNE4-208ENST00000511604 PCDHGA10Q9Y5H3 936 aa7.44□□□□□ -1.22
CPNE4-208ENST00000511604 MAGEB16A2A368 324 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 ISPDA4D126 451 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 TOR1BO14657 336 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 LYPLA1O75608 230 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-208ENST00000511604 BCAS2O75934 225 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-208ENST00000511604 SLITRK3O94933 977 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 IL18RAPO95256 599 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 GCNT3O95395 438 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 NDST3O95803 873 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 CD58P19256 250 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 PRDX5P30044 214 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 QARSP47897 775 aaKnown RBP7.43□□□□□ -1.22
CPNE4-208ENST00000511604 ALDH7A1P49419 539 aaKnown RBP7.43□□□□□ -1.22
CPNE4-208ENST00000511604 ACOT2P49753 483 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 BST2Q10589 180 aaKnown RBP7.43□□□□□ -1.22
CPNE4-208ENST00000511604 ILF2Q12905 390 aaKnown RBP7.43□□□□□ -1.22
CPNE4-208ENST00000511604 BNIP2Q12982 314 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 NAB1Q13506 487 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 PON2Q15165 354 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 LEXMQ3ZCV2 418 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 MTX3Q5HYI7 312 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 TOR2AQ5JU69 321 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 AGAP6Q5VW22 663 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 PDPK2PQ6A1A2 396 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 CORO6Q6QEF8 472 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 USP17L6PQ6QN14 398 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 MAMDC4Q6UXC1 1216 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 USP37Q86T82 979 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 GATAD2AQ86YP4 633 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 HID1Q8IV36 788 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 IGDCC3Q8IVU1 814 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 PHTF2Q8N3S3 785 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 CARNMT1Q8N4J0 409 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 LRRC20Q8TCA0 184 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 SNX19Q92543 992 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 MARC2Q969Z3 335 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 ACSF2Q96CM8 615 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-208ENST00000511604 CEP95Q96GE4 821 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 MAGED4Q96JG8 741 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 AGAP4Q96P64 663 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 CDRT15Q96T59 188 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 ANO3Q9BYT9 981 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 QTRT2Q9H974 415 aaKnown RBP7.43□□□□□ -1.22
CPNE4-208ENST00000511604 C6orf50Q9HD87 102 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 SMOXQ9NWM0 555 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 COPG2Q9UBF2 871 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 DNPEPQ9ULA0 475 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 TNS3Q68CZ2 1445 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 ALS2Q96Q42 1657 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 C16orf96A6NNT2 1141 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 USP17L5A8MUK1 530 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 COPEO14579 308 aa7.43□□□□□ -1.22
CPNE4-208ENST00000511604 YKT6O15498 198 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms