RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SKAP2O75563 359 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 WDR47O94967 919 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 FGAP02671 866 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 TMEM225BP0DP42 221 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 MYCLP12524 364 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 CREB1P16220 341 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 CERS1P27544 350 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 AVPR2P30518 371 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 MCM5P33992 734 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 TUBA4AP68366 448 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 SSBP2P81877 361 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 PPATQ06203 517 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 PPIGQ13427 754 aaKnown RBP eCLIP4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 TRIM14Q14142 442 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 PTK2BQ14289 1009 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 PFKFB4Q16877 469 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 TUBB8Q3ZCM7 444 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 ZACNQ401N2 412 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 PARP10Q53GL7 1025 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 MTX3Q5HYI7 312 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 SLC10A5Q5PT55 438 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 L1TD1Q5T7N2 865 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 TLDC1Q6P9B6 456 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 KIF6Q6ZMV9 814 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 PTCHD4Q6ZW05 846 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 RASGRP3Q8IV61 690 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 ADHFE1Q8IWW8 467 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 FAM71BQ8TC56 605 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 GRAMD1AQ96CP6 724 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 NUDT22Q9BRQ3 303 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 OBP2BQ9NPH6 170 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 HELLSQ9NRZ9 838 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 ADAM21Q9UKJ8 722 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 ZNF462Q96JM2 2506 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 CHD9Q3L8U1 2897 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 CHD7Q9P2D1 2997 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 CACNA1IQ9P0X4 2223 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 DNAH12Q6ZR08 3092 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 MAP3K15Q6ZN16 1313 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 CLRN2A0PK11 232 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 AQP12BA6NM10 295 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 LGALS16A8MUM7 142 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 CES2O00748 559 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 PCDH17O14917 1159 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 TMPRSS11DO60235 418 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 PDE8BO95263 885 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 BMP15O95972 392 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 PRR35P0CG20 571 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 SRGAP2BP0DMP2 458 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 KELP23276 732 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 CCND3P30281 292 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 DIO1P49895 249 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 PSG6Q00889 435 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 DEUP1Q05D60 604 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 ELF2Q15723 593 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 TRIM71Q2Q1W2 868 aaKnown RBP4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 AASDHQ4L235 1098 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 RNASE12Q5GAN4 147 aaKnown RBP4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 GRHL2Q6ISB3 625 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 CEP85Q6P2H3 762 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 SLC29A4Q7RTT9 530 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 ZNF804AQ7Z570 1209 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 SFTPA1Q8IWL2 248 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 EXOC8Q8IYI6 725 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 KCNG4Q8TDN1 519 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 LPAR1Q92633 364 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 RPL36ALQ969Q0 106 aaKnown RBP4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 VPS50Q96JG6 964 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 UTP14AQ9BVJ6 771 aaKnown RBP4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 MYH16Q9H6N6 1097 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 RXFP3Q9NSD7 469 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 MGAT4CQ9UBM8 478 aa4.04□□□□□ -1.76
TOPBP1-208ENST00000511439 PRRC2BQ5JSZ5 2229 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 TECTAO75443 2155 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 FNDC1Q4ZHG4 1894 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 LOC102724159A0A0B4J2E5 919 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 TARM1B6A8C7 271 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 J3KTA2 159 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 SYT5O00445 386 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 ASNA1O43681 348 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 JTBO76095 146 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 CSTBP04080 98 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 HNRNPCP07910 306 aaKnown RBP eCLIP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 ITGA5P08648 1049 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 NPPBP16860 134 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 FPR3P25089 353 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 SERPINF1P36955 418 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 PBX1P40424 430 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 DGKQP52824 942 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 CYP4F2P78329 520 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 TLE2Q04725 743 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 SIGLEC14Q08ET2 396 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 TEFQ10587 303 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 LMAN2Q12907 356 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 BLMHQ13867 455 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 KCNJ12Q14500 433 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 DHX8Q14562 1220 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 PWP2Q15269 919 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms