RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 HOMER3Q9NSC5 361 aa16.56■□□□□ 0.24
NDFIP1-204ENST00000509436 OBP2AQ9NY56 170 aa16.56■□□□□ 0.24
NDFIP1-204ENST00000509436 SMARCAL1Q9NZC9 954 aa16.56■□□□□ 0.24
NDFIP1-204ENST00000509436 TBC1D14Q9P2M4 693 aa16.56■□□□□ 0.24
NDFIP1-204ENST00000509436 SHROOM3Q8TF72 1996 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 IGLV3-10A0A075B6K4 115 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 GOLGA6L7A0A1B0GV03 622 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 CTAGE15A4D2H0 777 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 H0Y626 953 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 CCDC188H7C350 402 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 PDE2AO00408 941 aaPredicted RBP16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 CHADO15335 359 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 GREM1O60565 184 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 TRIM16O95361 564 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 CTAGE8P0CG41 777 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 ERCC2P18074 760 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 SLC6A4P31645 630 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 SERPINB6P35237 376 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 FCHO2Q0JRZ9 810 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 TTC39BQ5VTQ0 682 aaPredicted RBP16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 TMCO3Q6UWJ1 677 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 BZW1Q7L1Q6 419 aaKnown RBP16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 ZNF572Q7Z3I7 529 aaPredicted RBP16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 CTAGE6Q86UF2 777 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 CTAGE4Q8IX94 777 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 FAM217AQ8IXS0 508 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 ZNF683Q8IZ20 524 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 CPXM2Q8N436 756 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 PQLC3Q8N755 202 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 RSPRY1Q96DX4 576 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 FRMD8P1Q9BZ68 369 aaPredicted RBP16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 SCUBE2Q9NQ36 999 aa16.55■□□□□ 0.24
NDFIP1-204ENST00000509436 DRGXA6NNA5 263 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 HEPACAM2A8MVW5 462 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 APOC4-APOC2K7ER74 178 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 KHNYNO15037 678 aaKnown RBP16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 DCLK1O15075 740 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 RHOBTB1O94844 696 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 APOC2P02655 101 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 RHOQP17081 205 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 C19orf57Q0VDD7 668 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 PON2Q15165 354 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 ELF2Q15723 593 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 C5orf22Q49AR2 442 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 RFWD3Q6PCD5 774 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 BBS7Q8IWZ6 715 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 CAMKK1Q8N5S9 505 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 PLD5Q8N7P1 536 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 HJURPQ8NCD3 748 aaPredicted RBP16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 P3H4Q92791 437 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 OTUB2Q96DC9 234 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 HERPUD2Q9BSE4 406 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 CARD6Q9BX69 1037 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 AP1M1Q9BXS5 423 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 ACACAQ13085 2346 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 MYO18BQ8IUG5 2567 aa16.54■□□□□ 0.24
NDFIP1-204ENST00000509436 APC2O95996 2303 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 HECTD1Q9ULT8 2610 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 CHD5Q8TDI0 1954 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 ZNF462Q96JM2 2506 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 SPAARA0A1B0GVQ0 90 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 TCRBV7S2A1N4TA0A589 114 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 WASH4PA8MWX3 477 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 SCAMP3O14828 347 aaKnown RBP16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 CYBBP04839 570 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 NR2C2P49116 596 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 ADCY2Q08462 1091 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 PAFAH1B3Q15102 231 aaKnown RBP16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 NCBP2-AS2Q69YL0 99 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 RAB44Q7Z6P3 723 aaPredicted RBP16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 PIP4P1Q86T03 277 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 LZTR1Q8N653 840 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 RTL3Q8N8U3 475 aaKnown RBP16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 SPATA4Q8NEY3 305 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 BPIFB1Q8TDL5 484 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 IGSF8Q969P0 613 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 SLC32A1Q9H598 525 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 NEU3Q9UQ49 428 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 RAD54BQ9Y620 910 aa16.53■□□□□ 0.24
NDFIP1-204ENST00000509436 MCF2LO15068 1137 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 TSPAN3O60637 253 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 PHF2O75151 1096 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 C1QL1O75973 258 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 SLU7O95391 586 aaKnown RBP16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 IFNAR2P48551 515 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 MAPKAPK2P49137 400 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 CDH4P55283 916 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 OTUD4Q01804 1114 aaKnown RBP16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 SIX1Q15475 284 aaPredicted RBP16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 MPPE1Q53F39 396 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 CHST9Q7L1S5 443 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 CCDC117Q8IWD4 279 aaPredicted RBP16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 ACTL9Q8TC94 416 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 MAGOHBQ96A72 148 aaKnown RBP16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 HAUS1Q96CS2 278 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 TMA16Q96EY4 203 aaKnown RBP16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 RUNDC3BQ96NL0 473 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 ETNK2Q9NVF9 386 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 TMEM248Q9NWD8 314 aa16.52■□□□□ 0.24
NDFIP1-204ENST00000509436 THG1LQ9NWX6 298 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms